Pseudomonas mucidolens: NCTC8068_01235
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Entry
NCTC8068_01235 CDS
T08935
Symbol
agaB
Name
(GenBank) beta-agarase B
Organism
pmud
Pseudomonas mucidolens
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Agarase_CBM
Glyco_hydro_42
P_proprotein
Motif
Other DBs
NCBI-ProteinID:
SQH32278
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All DBs
Position
1:1368968..1371322
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AA seq
784 aa
AA seq
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MIRTLPALFALLFAAPVLAAPAGQQTLFNFVRPADVVTVATQDAVLPQYNAEQTPEGEVL
RRIIFNPTAEPSLLLSPQSGVWDWSQSGVMSLRIQSAMDWALTLYVKIQSKDGKTLVSRV
DLPAGPAQTLLVPLQANSPLSQGMKAGPPMPITVDGQRVLLAGSSGEIDRSQVVSVTLSM
LKPDTPQSILLERFGVQDSEPALKAAYSELVDAYGQSTRGRWPEKISDDEQLKAAAATEQ
QQLKGWLAQRDKTSLDTFGGWTKGPAFEASGFFRTEKRDGRWYLVTPLGHPFYSLGVNTV
AANNSQTYVAGREWMFAALPKAGEPFDKYYGSGDNRSGNGSGQGRSFAAGRWYDFYGANL
QRTHGQPCEAKAKAAQTPAVQAPPCTPQGFDAKRWVGHTLDRLQAWGFNTIGNWSAPELG
AADRVPYTLPLSIVGDYTSISTGIDWWGGIPDPFDPRFAMAAERAVAIATRDHRDDPWLI
GFFADNELAWAGPGEDAKSRYALAYGTLLMTTDVPAKRAFLKQLRDKYRNQAGLSNAWGI
ELPAWELMEDPGFVPPMPSPEHPEIEADFKHFQKTFADAYFKTISDALKWHAPNQMLLGG
RYAVSTPEAVASCAQYCDVLSFNMYTLKPQDGYDFAALRALDKPVLITEFNFGSADRGPF
WGGVTQLAREEDRGPAYATFLKQALAEPSIVGVHWFQYLDQPATGRLLDGENGHFGLVGI
TDVPFHGFVDSVRKSNLAALRQLSKEAEKAKVAAHSEEDGKPGGGHKATAQDGGPADGHE
SNGH
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcacgctgcccgccctttttgccttgctgtttgcagcgcccgtgctggctgca
ccggcgggtcaacaaacactgttcaattttgttcgacccgcagacgtggtgacggtcgcg
acccaggatgccgtcctgccgcaatacaacgctgaacaaacccctgaaggcgaagtgttg
cgccgcatcatcttcaatccgacagcggagccgagtctgctgctcagcccgcagagcggc
gtctgggactggtcgcagtctggcgtcatgagcttgcgtatccaaagcgcgatggactgg
gcgctgaccctgtatgtcaagattcagagcaaggatggcaagaccttggtcagccgcgtc
gacctgcctgccggccctgcgcaaaccttgctggttcccctgcaagccaactcgccattg
agccagggcatgaaggccggcccgccgatgccgatcaccgttgacggccagcgggtgtta
ctggctggcagttccggcgagatcgatcgtagccaggtggtgtctgtcacgttgtcgatg
ctcaagcccgacacgccccagagcatcctgctggaacgctttggtgtgcaggacagcgag
ccggcgctcaaggcggcctacagcgagttggtggatgcctacgggcaatcgacccggggg
cgctggccggaaaaaatcagcgatgacgagcagttgaaagctgcggcagccactgagcag
cagcaactcaagggctggctggcccagcgtgacaagacttccctggataccttcggcggc
tggaccaagggcccggccttcgaggccagcggtttttttcgcaccgagaagcgtgatggc
cgctggtacctggtgacgccgctagggcatccgttctactcactgggtgtcaacaccgtt
gccgcgaataacagccagacctacgtcgcgggccgtgaatggatgtttgccgcgctgccc
aaggccggcgagccgtttgataaatactatggcagcggtgataaccgcagcggcaatggt
tccggccaggggcgcagtttcgccgccggtcgctggtatgacttttatggcgccaacctg
caacgtacccatggtcagccctgcgaggccaaagcgaaggctgcacagacgcctgcggtt
caagcgccgccctgcacgccgcagggtttcgacgcgaagcgctgggtcggccacaccctc
gaccgtctgcaagcctggggattcaacaccattggcaactggagcgcgccggagttgggc
gcggctgatcgcgtgccctacacgctgccgctgtcgattgttggcgattacaccagtatc
agcaccggtatcgattggtggggcgggatacctgatcccttcgacccgcgctttgccatg
gctgccgagcgcgccgtggcgatcgccacccgagatcatcgtgacgacccttggctgatc
ggtttttttgcggataacgaattggcgtgggccggccccggagaggatgcgaagtcgcgc
tatgccttggcctacggcacgctgctcatgaccaccgatgtgccggccaagcgtgcgttt
ctcaagcaactgcgagacaaataccggaatcaggccggcctgtcgaacgcctggggcatt
gaactgccagcctgggaattgatggaagacccaggtttcgtgccgccgatgccgagtcct
gaacacccggaaatcgaagcggacttcaaacacttccagaaaactttcgccgatgcgtat
ttcaagaccatctccgacgcgctgaaatggcatgcgcccaaccagatgctgctgggtggc
cgctatgcggtcagcacccccgaagccgtggcatcctgcgcccagtattgcgatgtgctg
agtttcaacatgtacaccctcaagccccaggatggttacgacttcgcggccttgcgggcc
ctggataaacccgtcttgatcaccgagttcaacttcggctcggccgaccggggcccgttc
tggggcggcgtgacgcagttggccagggaagaagaccggggcccggcgtatgcgactttc
ctcaagcaagcgctggctgagccgtcgattgtcggcgtgcactggttccagtacctcgac
cagccggctacgggtcgcctgctggatggtgaaaacggtcacttcggcttggttgggatc
accgacgtgccgttccatggttttgtcgacagtgtgcgtaaaagcaacctggcggcgctc
cggcaactaagcaaggaggctgaaaaagccaaggtggcggcccattcagaagaggacggc
aagccagggggtggccacaaggcaaccgcacaggacggtgggccggcggatggtcacgag
agcaatggtcactga
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