Pseudomonas mucidolens: NCTC8068_01630
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Entry
NCTC8068_01630 CDS
T08935
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud03030
DNA replication
pmud03430
Mismatch repair
pmud03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC8068_01630 (dnaX)
03430 Mismatch repair
NCTC8068_01630 (dnaX)
03440 Homologous recombination
NCTC8068_01630 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmud03032
]
NCTC8068_01630 (dnaX)
03400 DNA repair and recombination proteins [BR:
pmud03400
]
NCTC8068_01630 (dnaX)
Enzymes [BR:
pmud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC8068_01630 (dnaX)
DNA replication proteins [BR:
pmud03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC8068_01630 (dnaX)
DNA repair and recombination proteins [BR:
pmud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC8068_01630 (dnaX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
ResIII
AAA_14
AAA_18
TIP49
AAA_30
PIF1
AAA_2
AAA_19
TsaE
nSTAND3
AAA_7
HasA
Rad17
DUF3646
Mg_chelatase
SKI
zf-CXXC
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
SQH32662
LinkDB
All DBs
Position
1:1790063..1792123
Genome browser
AA seq
686 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP
ERVVEHLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVMAADVRAM
LGTLDHGQVFDVLHALIEGDAKALLEAIRHLSEQGPDWNGVLSEILNVLHRVAIAQALPE
GVDNGHGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADTDDAPRQPLKPVGISQATVDSTQSVAGAAAVVPVVAPSVATPEPAAPAPIVAEPEAPV
VLPGPVVEPEAAPVVDLPWNDPLEAPVEQQPAVEPVLETIGEQPDLTPMPAPTPDSVVPD
APERASAPVPEPTIAEVDAATPGIDLDDEPPLDEDYIEPDMDSAYSYLDELASEHTAEPA
PEPEAEPAAMPATGLALQWLELFPKLPISGMTGSIAANCTLIAVDGDHWLLHLDPAHSAL
FNATQQRRLNDALNQYHERTLTVTIELIKPEQETPAQAATRRRLNRQREAEESIQGDPLI
QQMMEQFGAVVRHDTIEPVEAQAAQG
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
cagacccatgtgctcaaggctctgatcaatgccttggacagccaacggctgcaccacgcc
tacctgttcaccggcacgcgcggggtgggcaaaaccacgattgcgcggattatcgcaaag
tgcctgaactgtgagaccggcatcacctcgacgccgtgcggcacttgctcggtgtgccgg
gagatcgacgaagggcgctttgtcgacctgatcgagatcgacgccgcgagccgtaccaag
gtcgaagacacgcgcgagttgctggataacgtgcagtacgctcccagccgtggtcgcttc
aaggtctacctgatcgacgaagtacacatgctgtccagccattccttcaacgccttgttg
aaaaccctggaagagccgccgccctacgtcaagttcatcctggctaccaccgatccgcag
aaacttcctgcaacgattttgtcgcggtgcctgcagttctctctgaaaaacatgaccccg
gagcgggtggtcgagcatctgacccacgttctgggcgtcgaaaacgtgccctttgaagac
gatgcactgtggttgctgggacgtgccgccgatggttcgatgcgtgatgccatgagtctc
accgaccaggcgattgccttcggcgaaggcaaggtcatggccgctgacgtgcgggcgatg
ctcggtacgctggatcacgggcaggtttttgatgtgctgcatgcgttgatcgaaggggat
gccaaggcattgctcgaagcgatccgtcatctgtccgagcaaggcccggactggaacggc
gtgctgtcggaaatccttaacgtgttgcaccgtgtcgctatcgcccaggccttgccggaa
ggcgtcgacaacggccatggcgaccgtgaccgcgtgttggccctggcccaggcgctgccg
gccgaagatgtgcagttctactaccagatggggctgatcgggcgtcgcgacttgccgttg
gcgccagacccgcgtggcggtttcgagatggtcctgttgcggatgctggcgttccggccc
gccgacaccgacgatgcgccgagacaaccgctaaagccagtggggatcagccaggccaca
gttgattccacccaatcagtggctggcgcggcggcagtcgtgccagtggtcgcgccgagc
gtggcgacaccggaacctgcagcaccagcaccgattgttgctgagccggaagcgcctgtg
gtgttgcctgggccggtggtcgaacccgaagcggccccggtggtcgacttgccctggaac
gacccgctagaagcgccagtcgagcagcaaccggcagtcgagccggtattggagacgatt
ggcgaacagcccgatctcacgccgatgcccgcgccgaccccggacagcgtagtaccggat
gccccggagcgggcctcggctccggtgcctgagccgaccattgccgaagtggatgccgca
accccggggatcgatctcgacgacgaaccgccgctggacgaagattacatcgagccggac
atggattcggcctacagctatctggatgagttggccagcgagcacaccgccgaaccggcg
ccggagcctgaagctgagcccgcagcgatgccggccaccggcctggcgttgcaatggctg
gagctgttcccgaaattgccgatctccggcatgaccggcagcatcgccgccaactgcacg
ttgattgccgtcgatggcgatcactggctgttgcacctggacccagcccacagcgcgctg
ttcaacgccacccagcagcgtcgtctcaatgatgcgctgaaccagtaccacgaacgtacg
ctgacggtgaccatcgagctgatcaagcccgagcaggaaaccccggcccaggccgccact
cgccgtcgtctcaaccgccagcgcgaggccgaagagtcgatccagggtgatccgctcatc
cagcagatgatggaacagttcggcgcagtggtgcgacacgatactattgaacccgtcgag
gcccaggcagcacagggctga
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