Pseudomonas mucidolens: NCTC8068_01646
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Entry
NCTC8068_01646 CDS
T08935
Symbol
wapA_1
Name
(GenBank) Rhs-family protein
Organism
pmud
Pseudomonas mucidolens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
PAAR_motif
TEN_YD-shell
Motif
Other DBs
NCBI-ProteinID:
SQH32678
LinkDB
All DBs
Position
1:complement(1806714..1811090)
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AA seq
1458 aa
AA seq
DB search
MSDALWAARMGDALNHTSMMADILGGVLEVAANIAITALATAAVVAATGITVATGGLGCF
LLGAVVGTVVGIAMSKTGADEGLSDMCEGIGNALFPPTVQANILTGSKDTFTNNIASARA
AGAVMSHVAPAGTELEMLEPEEQPEPSYLDMAGNFFSQMWRPTVATPAPGTETRPEDLVI
CTKHPPMPPQFMAEGSDKVTINGQPAVRSGDRSTCDATVVSAGLISSNVTIGGGSVVVRE
IRSGKTPGVGLAVTALLMLKGGKGKFFSKLPCMLAGGAASMAVSSAMGAAANAAMGSSNP
VHAATGAKVLGRDEELDFVLPGVLPIDWQRFYNSRDERSGSLLGAGWSVPYEVCVESRPH
PEGGETLVYTDEQARLIDMGAIPLGGAVFSPGEGLAVRRHLNGQMLIESDDGLYRLFEPT
PANPSRLRLSQLGDRNDNRIFLDYDAAGRLIRLRDTFDQVHVELIREGEHLSRLERLYPD
QQREVLVSYAYDATHNLSEVRDASGQVQRRFSYDAGQRMVEHQLPTGLRCFYEWGLIDEL
EWRVVRHWTDEGDAYQFDYDLKAGLTRITDGLQRVSTRQWNSQHQITRYSDNLGQTWLFE
WNDERQMLSATDPQGGRYAYSYDEAGNLIGETDPLGRSDSTLWLEHWALPLVDTDAAGHS
WKYRYDQRGNCTAETDPLGHVTRYRYDAHGQVVEIIDASGKSKKLRWNPFGQLVEHIDCS
GYPTRFSYDQRGYLQTITDALGERTQFSYDAQGRLLSSQLPDGRTEHYQRDIAGQLTGYT
DPAGHTTLYQHNRRGQVRQRTDAHGRQVQFGYDSYGRLQTLTNENGERYRFAWDAGDRLT
EQQDLDGSAKRYAYDLLDNVAALTALPAPYGTGLAVIPEAPPAPIVHRLERDAVGRLIAK
VTDDGRTEYTYDALDQLTAVTFTDLHGTAQTLGFAYDPLGQLLSEHSATGSLQHHYDELG
NLIQSQLPDGRWLNRLYYGSGHLHQINLDGQVISDFERDRLHREVLRTQGQISTRSEYDR
TGRLRARQRRHSSQPALMPAALQKHFEYDPADNLIGKLDQQPAAQQRQLLHYDATGRIIA
SQDSQHGQRETFAYDAAANLLDGPQTGAGLVVHNKLLTYQDKRYRYDAFGRMIEKRSATR
GLQRFAYDAEGRLIEVRNDNASVVKMTYDPLGRRIEKTEHGSDGYPLGETRFTWDGLRLL
QEHKHSQTSLYVYEDEGYQPLARVDGSGPLQKIRYYHNDLNGLPEQLTEADGHNVWQATY
RVWGNTLEEVREPYYIEEQNLRFQGQYLDRETGLHFNTFRFYDPDVGRFTTPDPIGLVGG
FNLYQYSPNPFGWVDPKGLACSAYRGKLNQKASQMRAMTKGSKEWKQAVIDSRTAMANGE
KFQVKVNSSSDAKAFLKESQGNMNRYKAHTQSARADGVAKYPKGYEQHMAPEGGFGDTPH
IKWYNNGGDGHIFYDIPN
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgcgctctgggccgcccgcatgggcgacgcgctcaaccacacctcgatgatg
gccgacattctcggcggtgtgctggaggtggcggccaatatcgcgatcactgccctggcg
acggctgccgtggtcgcggccaccggtatcaccgtggccaccggcgggctgggttgcttc
ctgcttggcgcagtggtggggacggtcgttggcatcgccatgagcaagaccggcgccgat
gaaggcctgagcgatatgtgcgagggcattggcaacgcgttgtttccgcccacggtgcag
gccaacatcctcaccggctccaaggacaccttcaccaacaatatcgcctcggcccgcgcc
gccggcgccgtgatgtcgcatgtggcgccggccggcaccgagctggagatgctcgagccg
gaagaacaacccgagcccagttacctggacatggccggcaatttcttctcgcagatgtgg
cgccccaccgtcgccacgcccgcccccggcaccgagacccggccggaagacctggtgatc
tgcaccaagcacccgccgatgccgccgcaattcatggccgaaggctcggacaaggtcacc
atcaacggccagcccgcggtgcgcagcggtgatcgcagcacctgcgatgcaacggtggtg
tcagccgggctgatttcctcgaacgtgaccattggcggcggttcggtggtggtgcgtgag
atccgcagcggcaagaccccgggcgtgggcctggcggtcaccgcgttgctgatgctcaag
ggtggcaagggcaagttcttcagcaaactgccgtgcatgctggccgggggcgcggcgtcg
atggcggtcagcagcgccatgggcgcggcggccaatgccgccatgggctcgtcgaacccg
gtgcatgccgcgaccggggccaaggtgctgggtcgcgatgaagagctggacttcgtcttg
cccggcgtgctgccgatcgactggcagcgcttctacaacagccgcgacgaacgctcgggc
agcctgctgggtgcgggctggagcgtgccctatgaagtgtgcgtcgagagccgtccgcac
cccgaaggcggcgaaaccctggtctacaccgacgaacaggcgcggctcatcgacatgggc
gcgatcccgttgggcggcgcggtgttcagccccggtgaaggcctcgccgtgcggcgccac
ctcaacgggcagatgctgatcgaaagcgatgacggcctgtatcgcctgttcgaacccacg
cccgccaacccctcacggctgcgcctgagccagctcggcgaccgcaacgacaaccgcatc
ttcctcgactacgacgccgccggacgcctgatacgcctgcgcgacaccttcgatcaggtg
cacgtcgagctgatccgcgaaggcgaacacctcagccgcctggaacgcctctaccccgac
caacagcgcgaagtgctggtcagctacgcctacgacgcgacgcacaacctgagcgaagtg
cgcgacgccagcggccaggtgcaacggcgcttcagctacgacgccggccagcgcatggtg
gaacaccaactgcccacagggctgcgttgcttctacgaatgggggttgatcgacgagctg
gaatggcgcgtggtccgccactggaccgacgagggcgacgcctaccagttcgactatgac
ctcaaggccggcctcacccgcatcaccgacggtttgcagcgggtcagcacgcggcagtgg
aacagccagcaccagatcacccgctacagcgacaacctcggccagacctggctgttcgag
tggaacgacgaacgccagatgctcagcgccaccgatccgcaaggcgggcgctatgcttac
agctacgatgaagctggcaacctgatcggcgaaaccgatccgttgggccgcagcgattcg
acgttatggctggaacactgggccctgccgctggtagacaccgacgccgctggccacagc
tggaaataccgctacgatcagcgcggcaactgcaccgccgaaaccgatccgctggggcat
gtcacccgctaccgctacgacgcccacggccaagtagtggaaatcatcgacgccagcggc
aaaagtaaaaaactacgctggaatcccttcggccaattggtggaacacatcgattgctcg
ggctacccgacacgcttcagctacgaccaacgcggctatttacagaccatcaccgacgcc
ctcggcgagcgcacccagttcagctacgacgcccaggggcgtttgctcagcagccaattg
ccggacggccgcaccgagcactaccaacgcgacatcgccgggcagttgactggctacacc
gatcccgccgggcacaccacgctctaccaacacaaccgccgcggccaggtccgccagcgc
accgacgcccatgggcggcaggtgcaattcggctacgacagctacgggcggctgcaaacg
ctgaccaacgaaaacggcgagcgttatcggttcgcctgggatgccggcgatcggctaacc
gagcagcaggatctggacggcagcgccaagcgctacgcctacgatttactcgacaacgtc
gcggcgctgacggcgctccccgcgccctacggcacgggcctggcagtcattcccgaagcg
ccgccagcgcccatcgtccaccgcctggaacgcgacgccgtgggccgactgatcgccaag
gtcaccgacgatggccgcaccgaatacacttacgatgcgctagaccagctcaccgccgtc
accttcaccgatctgcacggcaccgcgcaaaccctgggttttgcctacgacccgctcggc
cagttgctcagcgaacacagcgccaccggcagcctgcagcatcactacgacgaactcggc
aacctcatccagagccaactgcccgacggccgctggctcaatcgcctgtactacggcagc
ggccacctgcaccagatcaacctcgacggccaggtcatcagcgacttcgaacgcgaccgc
ctgcaccgcgaagtgctgcgcacccagggccagatcagcacccgcagcgaatacgaccgc
accggccgcctgcgcgcccgccaacgccgccacagcagccaacccgcgctgatgccggcg
gcgctgcaaaaacacttcgagtacgaccccgccgacaacctgatcggcaaactcgaccaa
cagcccgccgcgcaacagcgccaactgctgcactacgacgccaccggccgcatcatcgcc
agccaagacagccagcacggccagcgcgaaaccttcgcctacgacgccgccgccaacctg
ctcgacggcccgcaaaccggtgccgggctggtggtgcacaacaaactgctgacctaccag
gacaagcgctaccgttacgacgcctttggccggatgatcgaaaaacgcagcgccacacgc
ggcctgcaacgcttcgcctacgacgccgaaggtcgcctgatcgaagtgcgcaacgacaac
gccagcgtggtcaaaatgacctacgacccattgggccggcgcatcgaaaaaaccgaacac
ggcagcgacggttatcccctcggcgaaacccgcttcacctgggacggcctgcgcctgctg
caggaacacaaacacagccagaccagcctttatgtttacgaagacgaaggctaccaaccc
ctggcccgcgtcgacggcagcggcccgctgcaaaaaatccgctactaccacaacgacctc
aacggcctgccggaacaactcaccgaagcggatggacataacgtttggcaagcgacgtat
cgggtgtggggcaacacgctggaagaagtgcgcgagccgtattacatcgaggagcagaac
ctaaggtttcagggccagtatctggaccgggagacggggctgcactttaatacgtttcgg
ttttatgatccggatgtggggcggtttacgacgccggatccgattgggttggtaggggga
tttaacctttatcaatattcgccgaacccttttgggtgggtcgaccctaaaggcttggcg
tgcagtgcttataggggaaaactgaatcaaaaagcatcccagatgcgtgcaatgactaag
ggctcaaaagagtggaaacaagcagtcatagatagccggacagccatggccaatggggaa
aaattccaggtaaaagtaaactcaagctcagacgccaaggctttcttgaaagaatcacaa
ggcaatatgaaccgctacaaagcccatacgcaaagtgctcgcgctgatggcgtagcaaag
tatccgaagggatatgaacaacacatggctccagagggcggttttggggatacacctcat
atcaagtggtacaacaatggaggggacggtcatatattctatgacattcctaactaa
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integrated database retrieval system
