Pseudomonas mucidolens: NCTC8068_01670
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Entry
NCTC8068_01670 CDS
T08935
Symbol
fadB
Name
(GenBank) fatty oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud00071
Fatty acid degradation
pmud00280
Valine, leucine and isoleucine degradation
pmud00310
Lysine degradation
pmud00362
Benzoate degradation
pmud00380
Tryptophan metabolism
pmud00410
beta-Alanine metabolism
pmud00640
Propanoate metabolism
pmud00650
Butanoate metabolism
pmud00907
Pinene, camphor and geraniol degradation
pmud00930
Caprolactam degradation
pmud01100
Metabolic pathways
pmud01110
Biosynthesis of secondary metabolites
pmud01120
Microbial metabolism in diverse environments
pmud01200
Carbon metabolism
pmud01212
Fatty acid metabolism
Module
pmud_M00087
beta-Oxidation
pmud_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
NCTC8068_01670 (fadB)
00650 Butanoate metabolism
NCTC8068_01670 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
NCTC8068_01670 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
NCTC8068_01670 (fadB)
00310 Lysine degradation
NCTC8068_01670 (fadB)
00380 Tryptophan metabolism
NCTC8068_01670 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
NCTC8068_01670 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
NCTC8068_01670 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NCTC8068_01670 (fadB)
00930 Caprolactam degradation
NCTC8068_01670 (fadB)
Enzymes [BR:
pmud01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
NCTC8068_01670 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
NCTC8068_01670 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
NCTC8068_01670 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
NCTC8068_01670 (fadB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
SQH32702
LinkDB
All DBs
Position
1:1836666..1838813
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVTALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMASSAKIGLPEVKLGIYPGFGGTVRLPRIIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVAPEKLAEAALNLIKGAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAQVK
EDTILASNTSTISITLLAQALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEAKRLGQKNGKGFYAYETDKKGKQ
KKVADPSVHEVLAPIVYEQREVSDEDIINWMMIALCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGPLYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttacggctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaactg
cgtcaggccgtagacaccatcaaagcagatgcgtcggtcaagggcgtgatcgtttccagt
ggcaaggacgtgttcatcgtcggcgccgacatcactgaattcgtcgacaacttcaagctg
cccgatgccgagcttgtggctggcaacctcgaagccaacaagattttcagcgatttcgaa
gaccttaacgtaccgactgttgccgcgatcaatggcatcgcgctgggcggcggtctggaa
atgtgcctggccgcggatttccgggtcatggccagcagcgcaaaaatcggcctgccggaa
gtcaagttgggcatctacccaggcttcggcggtaccgtgcgcctgccgcgtatcatcggt
gccgacaacgccatcgagtggatcgccgcgggtaaggaaaaccgtgctgaagacgcattg
aaagtcggcgcagtggatgctgtggtggctcccgagaaactggcagaagcggcactgaac
ctgatcaagggcgccatcagcggcgaatttgactacaaggccaagcgtcagccgaagctg
gaaaaactcaagctcaacgccatcgaacaaatgatgtcgttcgagaccgccaagggcttt
gtcgcgggccaggccggtccgaactacccggcgcctgtcgaagccatcaagaccatccag
aaagctgcgaacttcggtcgtgacaaggcgctggaaattgaagcggctggcttcgtcaaa
ctggccaagacctctgccgcgcagagcttgatcggcttgttcctgaacgatcaggagctg
aagaaaaaagccaaggcctacgacgaaatcgccaaggacgtgaagcaggccgccgtactc
ggcgccggcatcatggggggcggtatcgcttatcagtcggcgtccaaaggcacaccgatc
ctgatgaaagacatcaacgaacacgggatcgagcagggtctggcggaagccgcgaaactg
ttggtgggccgcgttgataaaggccgcatgactgctgcgaaaatggctgaagtgcttaac
ggcattcgtccgaccttgtcctacggcgacttcggtcacgtcgacctggtggtcgaagcg
gttgtcgagaacccgaaggtcaagcaggcggtactcgctgaagtcgaagcccaggtcaag
gaagacaccattctggcgtccaacacctcgaccatctccatcaccttgctggcccaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaatccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagtgagctggccgttgccaccaccgtggct
tacgccaagaaaatgggcaagaacccgatcgtcgtcaacgattgcccgggcttcctcgtt
aaccgtgtactgtttccgtacttcggcggtttcgccaagttggtcagcgccggcgtggac
ttcgtgcgcattgacaaggtcatggagaaattcggctggccaatgggtccggcgtacctg
atggacgtggtcggcatcgacaccggccaccacggtcgcgacgtgatggctgaagggttc
ccggaccgcatgaaagacgaccgccgttcggctgtcgacgcgctctacgaagccaagcgc
ctgggccagaagaatggcaagggtttctacgcctacgagaccgacaagaagggcaagcag
aagaaagtcgccgatccttcggtgcatgaagtgctcgcgccgattgtctacgaacagcgt
gaggtgtccgacgaggacatcatcaactggatgatgatcgccctgtgcctggaaaccgta
cgttgcctggaagacggcatcgttgaaaccgccgccgaagccgatatgggcctggtctac
ggtattggtttccctccattccgtggtggtgcgctgcgttacatcgactcgatcggtgtg
gccgagttcgttgccctggctgatcaatacgctgatttgggcccgctgtaccacccgacc
gcgaagttgcgtgagatggccaagaacggccagagcttcttcggttaa
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