Pseudomonas mucidolens: NCTC8068_01761
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Entry
NCTC8068_01761 CDS
T08935
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pmud
Pseudomonas mucidolens
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmud03032
]
NCTC8068_01761 (gyrA)
03400 DNA repair and recombination proteins [BR:
pmud03400
]
NCTC8068_01761 (gyrA)
Enzymes [BR:
pmud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NCTC8068_01761 (gyrA)
DNA replication proteins [BR:
pmud03032
]
Prokaryotic type
DNA Topoisomerases
NCTC8068_01761 (gyrA)
DNA repair and recombination proteins [BR:
pmud03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC8068_01761 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
SQH32792
LinkDB
All DBs
Position
1:1929291..1931945
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AA seq
884 aa
AA seq
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MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTIDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSMIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA
VVAMVERAGADSCRPENLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILNSAVRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEER
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVEEYTEGHFIFMATAKGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTAR
GVRGMRLPEGQKLISMLIPEEGSEILTASARGYGKRTAISEFPEYKRGGQGVIAMVSNDR
NGRLVGAVQVLDGEEIMLISDQGTLVRTRVAEVSSLGRNTQGVTLIKLASDETLVGLERV
QEPSEVEGEELEGETFEGEVIAGSDDSVDEPTLDAAADEEEPQE
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tacctcgactacgcaatgagcgtaattgtcgggcgggcactgcctgatgcgcgcgatggc
ttgaagcccgtgcaccggcgtgtgctgttcgcgatgagcgagctgggtaacgactggaac
aagccgtacaagaaatctgcccgtgttgtcggtgacgtgatcggtaagtatcaccctcac
ggcgacactgcggtgtacgacaccatcgttcggatggctcaaccgttttccctgcgctac
ctgctggtagatggccagggcaacttcggttcggtcgacggcgacaacgccgcggccatg
cgatacaccgaagtgcgcatgaccaagctggcgcacgagttgctggccgacctgcataaa
gaaaccgtggactgggtgccgaactacgacggcaccgaaatgatcccggcggtcatgccg
acccgtattcccaacctgttggtcaacggttccagcggtatcgccgtaggcatggccacc
aacatcccgccacacaacctcggtgaagtcatcgacggttgcctggcactcatcgacaac
cctgagctgaccatcgatgagttgatgcagtacattcccggcccggacttcccgaccgcc
gcgatcatcaacggtcgcgccggcatcatcgaagcctaccgcaccggtcgtggccgcatt
tatatgcgtgcgcgctcgatgatcgaggacatcgacaaggtcggtggccgtcagcagatc
gtcattaccgagctgccttaccagttgaacaaggcgcgcctgatcgaaaaaatcgccgaa
ctggttaaagagaagaagcttgaaggcatcaccgagctgcgcgacgagtctgataaagac
ggtatgcgcgtggtgatcgagctgcgtcgcggcgaagtgcctgaggtgatcctcaacaac
ctctacgcccagacccagctgcaaagcgtgtttggtatcaacgtcgtggcattgatcgac
ggccgcccacgcatcctgaacctcaaggatctgctggaagcctttgtccgtcaccgtcgc
gaagtagtgacccggcgtaccgtgtttgaactgcgcaaggcccgtgaacgcgggcacatc
ctggaaggccaggcggtagcgttgtcgaacatcgacccggtgatcgccctgatcaaggct
tcgccgactccgtcggaagccaaggaagcgctgatcagcaccccttgggagtccagcgcg
gttgtcgcgatggtcgagcgcgccggtgccgattcctgccgtccggagaacctcgatccg
caatacggtctgcgtgaaggcaagtacttcctgtcgccggagcaggcccaggccatcctc
gagttgcgtctgcaccgcctgaccggcctggaacacgagaagctgctggccgaataccag
gaaattctcaaccagatcggcgagctgatccgcatcctcaatagcgctgtgcgcctgatg
gaagtgatccgcgaagagctggaagtgatccgcgccgaatacggcgacgtgcgccgtacc
gaaatcctcgacgcgcgtctcgacctgaccctgggtgacatgatcccggaagaagagcgt
gtggtgactatttcccacggcggctatgccaagactcagccactggctgcctatcaggcc
cagcgccgtggcggtaaaggcaagtcggcgaccggcgtcaaggatgaggactacattgct
cacctgctggttgccaacagccacaccacgctcctgctgttctccagcaagggcaaggtg
tactggctgaagacctacgaaatcccggaagcatcccgtgcggcccgtggtcgtcccttg
gtcaacctgctgccgctggacagtgatgaatacatcaccaccatgctgccggtcgaggaa
tacaccgaaggtcacttcattttcatggcgaccgccaagggcaccgtgaaaaagaccccg
ctggaatccttcagccgccagcgcagcgtgggcctgatcgccctggagctggacgaaggc
gacgtattgatctccgcagccatcaccgatggcgagcgtgaggtcatgctgttctccgac
ggtggcaaggtcacgcgcttcaaggagtctgacgtgcgtgccatgggccgtaccgcccgc
ggtgtgcgcggtatgcgtctgccggaagggcagaagctgatttccatgctgatcccggaa
gaaggcagcgagatcctcactgcttcggctcgtggttatggcaagcgtaccgctatcagc
gagttcccggagtacaagcgtggcggccagggtgtgatcgccatggtcagcaacgaccgt
aacgggcgtctggtcggcgcggtccaggtgctggatggcgaggaaatcatgttgatttcc
gaccagggcacactggtgcgtacccgtgtggctgaagtgtcgagcctggggcgtaacacc
cagggcgtgacgctgatcaagttggccagcgatgaaacgttggtcggcctggaacgcgtc
caggagccatcggaagtcgaaggtgaagagctcgaaggcgagacgtttgaaggcgaggtg
atcgcgggcagcgatgacagcgtcgacgagccaaccctcgacgctgccgcagacgaagaa
gaaccgcaggaataa
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