Pseudomonas mucidolens: NCTC8068_01814
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Entry
NCTC8068_01814 CDS
T08935
Symbol
ybiS
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
pmud
Pseudomonas mucidolens
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmud01002
]
NCTC8068_01814 (ybiS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmud01011
]
NCTC8068_01814 (ybiS)
Peptidases and inhibitors [BR:
pmud01002
]
Cysteine peptidases
Family C82
NCTC8068_01814 (ybiS)
Peptidoglycan biosynthesis and degradation proteins [BR:
pmud01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
NCTC8068_01814 (ybiS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
Motif
Other DBs
NCBI-ProteinID:
SQH32845
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All DBs
Position
1:1992722..1993687
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AA seq
321 aa
AA seq
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MLSRLPAVTRCLSLAALCAAGPAMALQLPLPPPGEDIVGQVQMIKAKYEDTFADLGVTYD
LGYAEMVAANPGVDAWLPGTGADIVLPTRFILPPGPREGIVINLAEYRLYYYPKGQDVVY
TFPLGIGREGWGSPIAHTSIIAKTPNPTWTPPASIKAEHAAEGDPLPNVVPAGPDNPLGP
FKFTLGTPGYLIHGSNKKFGIGTRTSHGCFRMFNENVLELADMVPVGTPVRIISEAYKFG
MSGGKVYLEAHTPLNDDGTPSVVDKHTAVINALLKREDLSNNLRVNWDEVRNVVAAEDGL
PTEIGVPGEATMVTSAPVDLQ
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgcgcctccctgccgtcacccgctgcctgtctctcgctgcactgtgtgcagcc
ggtcccgccatggccttgcagttgcccttgccaccaccgggtgaagacattgtcggccag
gtccagatgatcaaggccaagtacgaagatacttttgccgatctgggggtgacctacgat
cttggctatgcggagatggtcgcggccaacccgggcgtcgatgcgtggttgccaggaacg
ggggcggacattgtgctgccgacccgtttcatcctgccgccggggccgcgggagggcatc
gtgatcaacctggcggagtaccgcttgtattactaccccaagggccaggatgtggtttat
acgttcccccttgggatcggtcgtgaaggctggggttcgccgattgcccataccagcatc
atcgccaagacgccgaacccgacctggacaccgcccgcttcaatcaaggccgagcacgcc
gccgaaggtgatccgctgcccaatgtggtgcccgctggccccgacaatccgctggggccg
ttcaagttcaccctgggcacaccgggttacctgatccacggttccaacaagaagttcggg
attggcacgcgtaccagtcatggttgcttccgcatgtttaacgaaaatgtgcttgagttg
gcggatatggtgccggtgggcacgccggtgcggattatcagtgaggcctacaaattcggc
atgagcggtggcaaggtctacctggaagcgcacacacccttgaacgacgatggcacgccg
tcggtggtggacaagcacacagcggtgatcaacgccttgctgaaacgtgaagacctgtcg
aacaacctgcgcgtcaactgggatgaagtgcgcaatgtggtcgcggccgaagatggcttg
ccgacggagatcggagtcccaggcgaggcgacgatggtgaccagcgcgccggtggatctg
cagtag
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