Pseudomonas mucidolens: NCTC8068_01916
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Entry
NCTC8068_01916 CDS
T08935
Symbol
mrdA_1
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud00550
Peptidoglycan biosynthesis
pmud01100
Metabolic pathways
pmud01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NCTC8068_01916 (mrdA_1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NCTC8068_01916 (mrdA_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmud01011
]
NCTC8068_01916 (mrdA_1)
Enzymes [BR:
pmud01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NCTC8068_01916 (mrdA_1)
Peptidoglycan biosynthesis and degradation proteins [BR:
pmud01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
NCTC8068_01916 (mrdA_1)
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
SQH32941
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All DBs
Position
1:2100330..2102222
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AA seq
630 aa
AA seq
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MPAPIPLKDHAKEHRLVNKRLLACGMLVLCVTCALVARMYFLQVVQFDYHSTISENNRVH
VLPLPPARGLIYDRNGMVLADNRPSYNLTITRERATDLKGELDAIVTLLHLPTEDRASFD
KALKQARHPFVPVTLFYQLTEEQIAVLAVNQFRLAGVDVEAQFVRHYPLGPHFAHSVGYV
GRINEKESKTLDSVEYRGTQSIGKTGIERFYEAQLHGQVGYEEVETNAQGRVLRVLKHTD
PIPGKNIVLSLDVHLQEAAERALGDRRGSVVALDPETGEVLAMVSKPSFDPNLFVTGISF
KAYAALRDSLDRPLFNRALRGRYAPGSTIKPEVAIAGLDSGVVTAQTRVFDPGYYQLPNF
DHKYRNWNHSGDGWVDMDAAIMRSNDTYFYDLAHKLGIDRLHDYMAEFRLGQKVSLDMFE
ESAGLMPSQAWKRATRRQPWFPGETVILGIGQGYMQVTPLQLAQATALIANKGVWNRPHL
ARSIDGVPPVDRNPMPDIILKDPRDWELVNHGMQRVMHDPRGIARAAAAGAQYRIAGKSG
TAQVVAIKQGERYNRLKISERNRDNALFVGFAPAEHPQIVISVMIENGEAGGRVAGPVVR
EIMDAWLLDQHGHLKPQYAAPGKKSDKPHV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctccgatccccctcaaagatcatgcaaaagaacaccgcctggtcaacaaacgt
ctgttggcctgtgggatgttagtgctgtgcgttacctgcgccttggtagcgcgaatgtat
ttcctgcaagtggtgcagtttgattatcactccaccatctctgaaaacaatcgagtccat
gtcttacccctcccgccggcccgtggccttatctatgaccgcaacggtatggtgctggct
gacaatcgtcccagctacaacctgaccatcacgcgtgaacgcgccaccgacctcaagggt
gagttagacgctatcgtcactctcctgcatctcccaacggaagatcgagcatcgttcgac
aaggcgctgaaacaggcgcgccacccatttgtaccggtgacgctgttctaccaactgacc
gaagagcaaattgccgtattggccgttaaccaattccgtctcgcgggtgtggacgtggag
gctcagttcgttcgtcactatccgttgggccctcactttgcgcattccgtcggctatgtt
gggcgtatcaacgagaaagagtcgaagaccctggattcggtggagtaccgtggcacgcag
tcgatcgggaagaccgggatcgagcgtttctacgaggcacagctgcatggacaggtcggt
tacgaagaggtcgagaccaacgctcaaggccgagtcctgcgcgtgcttaagcataccgac
ccgattccgggcaaaaacatcgtgctcagtctggatgtacaccttcaggaggccgcagaa
agagccctgggtgatcgccgcggctcagtcgttgccctcgatcctgaaaccggtgaggtc
ctggcgatggtcagcaagccgagttttgacccgaacttgttcgtcactggtatcagcttc
aaggcgtatgccgcgttgcgtgactcccttgaccggccgctgttcaaccgggcgctgcgc
ggacgctacgcaccgggttcgacgatcaagccggaagtcgccatcgcgggtctcgacagc
ggcgtggtcaccgcgcagacccgcgtatttgaccccggttactatcagctcccgaatttc
gatcacaagtaccgcaactggaatcacagtggtgacggctgggtcgacatggacgccgcg
atcatgcgctccaatgacacctatttctacgacttggcccacaagctgggcatcgatcgt
ctgcacgactacatggctgagttccggcttggccagaaggtttccctggacatgttcgaa
gaatcggcaggcttgatgccgtcccaggcatggaaacgggcgacacgccgccagccttgg
tttccgggggaaactgtgattcttggcatcggccaaggctacatgcaagtcacgccactg
caattggcccaagccaccgcgctgatcgccaacaaaggggtgtggaaccgaccgcatttg
gccaggagcatcgacggtgtgccgcccgtggatcgaaatcccatgccggacatcatcctc
aaggatccacgggattgggagctggtcaatcatggtatgcaacgggtgatgcatgatccg
cgcggaattgcccgtgcagcggctgccggcgcgcaataccggattgccggcaagagcggc
acggcgcaggtggtcgcaatcaagcaaggcgagcgttacaaccgtttgaagatctcggag
cgcaatcgtgacaacgccttgtttgtcggttttgctccggcagagcatccacaaatcgtg
atttcggtaatgatcgaaaacggcgaggcgggtggtcgtgtggcaggtcccgtcgtgcgg
gaaatcatggatgcctggttattggaccagcacggtcatttgaaaccgcagtacgctgct
cccggcaaaaagtcggacaagccccacgtctga
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