Pseudomonas mucidolens: NCTC8068_02075
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Entry
NCTC8068_02075 CDS
T08935
Symbol
lptB_3
Name
(GenBank) ABC transporter
KO
K01995
branched-chain amino acid transport system ATP-binding protein
K01998
branched-chain amino acid transport system permease protein
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud02010
ABC transporters
pmud02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NCTC8068_02075 (lptB_3)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC8068_02075 (lptB_3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmud02000
]
NCTC8068_02075 (lptB_3)
Transporters [BR:
pmud02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
NCTC8068_02075 (lptB_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
ABC_tran
BCA_ABC_TP_C
AAA_21
AAA_29
SMC_N
AAA_30
AAA_23
3HBD
AAA_15
Motif
Other DBs
NCBI-ProteinID:
SQH33097
LinkDB
All DBs
Position
1:2306652..2308646
Genome browser
AA seq
664 aa
AA seq
DB search
MRNVQLIFGCLLLVLAAALPQAFQNPYYLHLVVVIGIYAVLLFGMDILVGYTGEVSLGHA
GLFAVGAYTAGLISTKLGLPFYAAVPAAMAVTAVFGGLLAFPALRVTGPYLAMVTLAFST
IIMILINEMDFLTNGPQGLQVQKPVFFDHRLTSEEFYYVVLAAVVLSFIAVTRILRSPLG
RAFEALRGSPVAADCMGVNVYRYKVLAFVISATFAGLAGSLFSYSEEYIAPNGFGFELNV
LFLLALILGGKKSRVGAILGASVVVLLPNWLSDLALFHSLVVGLVVIVALAVGAGLVRKR
FTPRQVALPCLALAVFVVFAFNITDITEQRLTIFGLMMLAVIYYLPNGVMGFLKAPFVRL
KADQSAATNLSKPRAVALWETDKSAQSSSEPLFMAKDIVMQFGGLKALNKVTLSITSGSI
HGLIGPNGSGKSTMMNVITGIYVPIAGAAVFDGHSIVGRPPSKIALGGIARTFQNVQLFG
EMSVLENVLVAFNHTFHRGLPAILLNLPGYRTEQQAAKDKALNILDFMGLKSLRDEEARN
LPYGKQRLLEIGRALALKPRMLLLDEPAAGLTAPDIADLVQIIKKIRDHGVTVVLIEHHM
DMVMSICDTVTVLDFGQKIAEGKPAVVQSDPRVIEAYLGGSAVEPEPEPSSEPGVPHVLI
QKEA
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacgtccaactcatcttcggctgccttttgcttgtgctggcagctgcattaccc
caggcattccaaaatccttattacctgcacctcgttgtagttatcgggatttacgcagtg
cttctctttggcatggatattctggtcgggtatacgggagaagtatctctcgggcacgcc
ggactatttgccgtaggcgcgtacacggcgggtttgatttcgacgaagcttggcttgcca
ttctatgcagcagtgcccgcggccatggcggtcacggcggtctttggcgggttgttagcc
ttcccggcgttgcgtgttaccgggccgtaccttgcaatggtcaccctcgcgttttcgacc
atcatcatgatcctcataaacgagatggattttcttactaatggccctcaagggttgcag
gtgcagaagccggtgttttttgaccacaggctcacttctgaggagttctactacgtcgtt
ctcgcagcggttgtcttgtcatttatcgccgtgacccgaatcctgcgctctccattaggg
cgagcgtttgaggcgctcagaggcagtccggtggctgcagactgcatgggagtcaacgtg
tatcgctacaaggtgctggcgttcgtcatcagtgccacatttgcagggcttgccggcagc
ttgttcagctattcggaggagtacattgctccgaacggatttggattcgagctcaatgtc
ctgttcctgcttgcattgatcctgggtggtaaaaagagtcgggtgggcgccattctgggc
gcgtccgtggtggtgttgcttcctaactggctttccgatcttgcgttgttccattcgttg
gttgtgggtctggttgtaattgtcgcgctggcggtgggagcagggcttgtacgaaaacgg
tttacacctcggcaagtcgcgctaccttgtttggcgctcgcggtgttcgtggtatttgcc
ttcaacatcactgacatcaccgaacaacggctgacgatcttcggtttgatgatgctcgcc
gtgatctattacctaccaaatggcgtcatgggctttctgaaagcacctttcgtgaggctc
aaagcagatcaatctgctgcaacaaatctgtccaagccccgagctgttgcgttatgggag
acagataagtctgctcaatcaagcagtgaacctctgttcatggccaaagacatcgtcatg
cagtttggcggtttgaaggcactcaacaaggtgaccttgtcaattaccagtggcagcatt
cacggactgataggccccaacggctctggcaagagcacgatgatgaacgtcatcaccggc
atttacgtgcccattgctggcgcggcagttttcgacggtcactccatcgtcgggcggcca
ccctcgaagatcgcactgggcggcatcgcacggacgtttcagaacgtccagctgttcggc
gaaatgagcgtcctcgaaaacgtgctggtggcgttcaaccatacattccatcgaggcttg
ccggcgatcctgttgaaccttccgggctatcgcacagaacaacaggcagcgaaggataaa
gcactcaacattcttgacttcatggggctcaagtccttgcgtgatgaagaagcgcgcaac
ctgccttacggcaaacaaagattgcttgagatcggccgggccctcgcactcaagccaaga
atgctgctgctcgatgaacccgctgcaggtctgactgcacctgatattgcggacctggta
cagatcatcaagaaaatccgagaccacggcgttaccgtcgtgctgatcgagcaccatatg
gacatggtcatgagcatttgcgacacggtcaccgtgctcgatttcgggcagaagattgcc
gagggtaagcctgccgttgtgcagtctgatccccgagtaattgaagcatatctgggtggt
tctgcggttgagccggaaccggagccatcctctgagcctggcgtaccccatgttctgatt
cagaaggaagcctga
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integrated database retrieval system
