Pseudomonas mucidolens: NCTC8068_02108
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Entry
NCTC8068_02108 CDS
T08935
Symbol
potD_1
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC8068_02108 (potD_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmud02000
]
NCTC8068_02108 (potD_1)
Transporters [BR:
pmud02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
NCTC8068_02108 (potD_1)
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GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
SQH33130
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All DBs
Position
1:2339573..2340607
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AA seq
344 aa
AA seq
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MSIIKKSLLQGSVAAVLALGASASVLADSVTFSGWGGALQDAERKAYLEPAAKALGVTIK
EDNMDGLAAVRAQVMSGKPKWDVVELGSTECAQAQQEGLVEPLDYSVIDATHVDKTVVSS
HWIASHAYATVVAWAEDSGAPVAKNWQQFFDPQVKGARALYRQPWLTMEAALLGDGVAPK
DLYPLDVERAIKVLARIKPQVVNWWSAGADSAQLLRSREVDFLAIWNGRVSEVKASGEPV
DYSFDGALLSHDCLVVPKGAPNKALAMKLIAQIMKPESQAMLATLIPYSPVNAKAYELPI
ITEQLAARLPTSPQNIDKVVAVSPQWWVKNQEAVRQRFALFLAN
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcatcaagaaaagccttctgcagggttcagttgctgcggtgttggccttgggc
gcaagtgcctctgtgctggcggacagcgtgaccttctccggttggggaggcgccttgcag
gacgccgagcgcaaggcttatctggagcccgccgcgaaggcgttgggtgtcacgatcaag
gaagacaacatggacggcctggccgccgttcgtgcgcaggtgatgtcgggcaagccgaag
tgggatgtggtggagttgggcagtaccgagtgcgcccaggctcaacaggaagggctggtc
gaaccgctggactactcggtgatcgatgccacgcatgtcgacaagacggtggtcagcagc
cactggattgccagtcacgcgtacgccacggtggtggcctgggctgaggacagcggagca
cccgtggcgaagaactggcagcaattcttcgacccgcaggtcaagggcgcgcgcgccctg
taccgtcagccctggctcaccatggaagcggccttgctgggtgatggtgtggcgcccaag
gacctgtatccgttggatgtcgagcgtgcgatcaaggtgctcgcgcgcatcaagccccag
gtggtcaactggtggagcgcaggggccgactcggcgcaattgttgcgcagtcgtgaagtg
gatttcctggcgatctggaatggtcgggtcagtgaggtcaaggccagcggtgagccagtc
gactacagcttcgacggggcgctgttgagccatgattgcctggtcgttcccaagggtgca
ccgaacaaggcgctggcgatgaagttgattgcccagatcatgaagcctgaaagccaggcg
atgctggccacgctgattccgtactcgccagtgaacgcgaaagcctatgagctgccgatc
attaccgagcaactggctgcgcgcctgccgacgtcgccgcagaacatcgacaaggtggtc
gcggtgtctccgcaatggtgggtcaagaatcaggaagctgttcgccagcgattcgccttg
ttcctggccaactga
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