Pseudomonas mucidolens: NCTC8068_02111
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Entry
NCTC8068_02111 CDS
T08935
Symbol
ydcV_1
Name
(GenBank) binding-protein-dependent transport system inner membrane protein
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC8068_02111 (ydcV_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmud02000
]
NCTC8068_02111 (ydcV_1)
Transporters [BR:
pmud02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
NCTC8068_02111 (ydcV_1)
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GFIT
Motif
Pfam:
BPD_transp_1
DUF7883
Motif
Other DBs
NCBI-ProteinID:
SQH33133
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All DBs
Position
1:2342670..2343485
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AA seq
271 aa
AA seq
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MSRFKQNLTGAVRASWLYLLVLVTMLFLVLPTLIVIPMSLSDARYLSFPPKSFSIEPFFS
YFASLEWRTATKVSLITATLTMLLATSLGTAAAYSLHVTQSRLSGVLRGLMLAPMIVPTI
FIAIGLFFVYARFDLNNTIPGLVLAHTLLALPYVVINVSAGLRSYDMTQEQAACILGATR
LRAFFDVTLPQIRFSVIAAAMFAFAISLDEAVISLFISGGDSSTLTKRMFSSLRSEIDPL
IAVVATLMTLLSIIMLCISIMAQRKAKRNAA
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgattcaaacaaaacctgacaggggcggtgcgcgcctcctggttgtacttgctg
gtgctggtgaccatgctgtttctggtgctgccgacgctgatcgtgatcccgatgtcgttg
tccgatgcgcgctacctgagctttccgcccaagtcgttcagtatcgagccatttttcagc
tacttcgcgtcgctggagtggcgcacggcaaccaaggtgtcgctcatcaccgccacgctg
accatgctgctggccacctccctgggcacagcggcagcgtattcgctgcatgtcacccag
tcgcgcctctcgggcgtgctgcgcggcctgatgctggcaccaatgatcgtgccaacgatc
tttatcgccattggcctgttttttgtctacgcgcgcttcgacctgaacaacaccatcccc
ggactggtgctggcgcatacgctgctggccttgccctatgtggtgatcaatgtcagtgcg
gggctgcgcagctacgacatgacccaggaacaggcagcctgtatcctcggcgccacccgg
ctgcgggcgttttttgatgtgacgttgccacagattcgcttttcggtgattgccgccgcg
atgttcgcctttgccatttccctggacgaagcggtgatctcgttgtttatcagtggcggt
gacagctcaaccctgaccaagcgcatgttcagttcgctgcgctccgagatcgatcccttg
atcgccgtggtggcgacgctgatgactctgctgtcgatcatcatgctgtgcatcagcatc
atggcgcagcgcaaggccaagaggaacgcagcatga
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