Pseudomonas mucidolens: NCTC8068_02259
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Entry
NCTC8068_02259 CDS
T08935
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pmud
Pseudomonas mucidolens
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmud03032
]
NCTC8068_02259
03400 DNA repair and recombination proteins [BR:
pmud03400
]
NCTC8068_02259
Enzymes [BR:
pmud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC8068_02259
DNA replication proteins [BR:
pmud03032
]
Prokaryotic type
DNA Topoisomerases
NCTC8068_02259
DNA repair and recombination proteins [BR:
pmud03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC8068_02259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
SQH33280
LinkDB
All DBs
Position
1:complement(2495732..2496760)
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AA seq
342 aa
AA seq
DB search
MPDSALFADLPRDLHYVDDTQPGLRRKKLRGKFQYFDADGQRISDAAEIQRINALAIPPA
YTDAWICADPQGHLQATGRDARGRKQYRYHPRWREVRDSDKYSRLQAFGNALPKLRKQLE
AQIATSGFNREKVLATVVSLLDATLIRVGNSQYARDNRSYGLTTLRTRHVDVKGSEIQFQ
FRGKSGIEHQVSVKDRRLANVIKRCLELPGQNLFQYLDENGERRTVSSTDVNAYLHSLTG
ADFTAKDYRTWAGSAQALAVLRELAWQPESDAKKHLVQMVKDVARQLGNTPAVCRKCYIH
PAVLEHFTLGELAKLPKPRARKGLKAEEVGLAMFLERLAATL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcccgactccgcgctgtttgccgacctgccccgcgacctgcattacgttgacgacacc
caacccggcctgcgccgtaaaaaactgcgcggcaagttccagtatttcgatgccgacggc
cagcgcatcagcgacgccgccgaaatccagcgcatcaacgccctggctatcccaccggcc
tataccgacgcctggatctgcgccgacccgcaaggccatctgcaggccaccgggcgcgat
gctcggggccgcaagcaataccgttatcacccgcgctggcgcgaagtgcgtgacagcgac
aaatattcgcgcctgcaggcgttcggcaacgcgctgcccaagctgcgcaagcaactggaa
gcgcaaatcgccacctctggctttaaccgggaaaaagtcctggcgaccgtggtgtcgttg
ctggacgcaacactgatccgggtcggcaacagccaatatgcgcgagacaaccgctcctat
ggactgaccaccctgcgcacgcggcatgtggacgtcaagggcagtgaaatccaattccag
tttcgcggcaagagcggcattgagcatcaggtcagcgtgaaggaccggcgactggcgaat
gtgatcaagcgctgcctggaactgccgggacagaacctgttccagtacctggacgaaaac
ggcgagcgacgtaccgtcagctccaccgacgtcaacgcctacttacacagcctcaccggc
gcggactttaccgccaaggattaccggacctgggccggtagcgcacaggcgttggcggtg
ctgcgggagttggcctggcaaccggaatccgacgcgaaaaagcacctggtccagatggtc
aaggatgtcgccaggcagttgggtaataccccagcagtgtgccgcaaatgctacattcat
ccggctgtgctcgagcactttaccctcggagaactggcgaaattgcccaagccccgggca
cgcaaagggttgaaagccgaggaagtgggattggcgatgtttctcgaacgactggctgcg
accttgtag
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