Pseudomonas mucidolens: NCTC8068_02578
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Entry
NCTC8068_02578 CDS
T08935
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud00500
Starch and sucrose metabolism
pmud01100
Metabolic pathways
pmud01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
NCTC8068_02578 (glgX)
Enzymes [BR:
pmud01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
NCTC8068_02578 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Glyco_hydro_31_2nd
GHL5
Motif
Other DBs
NCBI-ProteinID:
SQH33599
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All DBs
Position
1:2863087..2865246
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AA seq
719 aa
AA seq
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MSKPDKAQPTPASEPSRIREGLPFPLGATWDGLGVNFALFSANATKVELCLFDDSGEIEL
ERIELPEYTDETFHGYLPDAHPGLIYGYRVYGPYDPANGHRFNHNKLLIDPYAKQLVGEL
KWSEALFGYTIGHPDADLSFDERDSAPFVPKSKVIDPAHTWGNDLPVRTPWDRTIIYETH
LRGISMRHPSVPEAARGTCAGLMEDDVLKHIRQLGVSSVELLPVHAFVNDQHLLEKGMTN
YWGYNSIAFFAPDPRYLASGKIAEFKEMVAHLHEAKLEVILDVVYNHTAEGNEQGPTLSM
RGIDNASYYRLMPDDKRYYINDSGTGNTLDLSHPCVLQMVTDSLRYWATEMHVDGFRFDL
ATILGRYHEGFDERHSFLVACRQDPILRQVKMIAEPWDCGPGGYQVGKFPPGWMEWNDRF
RDTVRAFWKGDDGQLADFAGRMTASGNMFNQRGRRPYSSVNFITAHDGFTLHDLVSYNDK
HNEANDENNQDGSNNNLSWNCGVEGPTDDPEINALRLRQMRNLFATLLLAQGTPMLVAGD
EFARTQHGNNNAYCQDSEIGWVNWDLDEDGKALLQFVKRLIKLRQAYPILRRGRFLVGDY
NEDIGVKDVTWLAPDGNEMATEQWHDSHGRCLGMLLDGRAQETGIRRPGADATLLLVVNA
HHDVVNFRLPPVPDGGFWTCLVDINQTAVRGQERFDFDHEYAVTNRSLLLFELQQEDEV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacccgacaaagcccaaccgacgcccgccagcgagccgtcgcggattcgtgaa
ggtttgcccttccctctgggcgccacctgggatggcctgggcgtcaacttcgcgctgttc
tcggccaacgccaccaaagtcgagctgtgtttgttcgatgacagcggtgaaatcgagctg
gaacgtatcgaactgcccgaatacaccgatgaaaccttccacggctacctgcctgacgcc
catcccggcctgatctacgggtatcgcgtctacggtccttacgatccggccaacggtcat
cgcttcaaccacaacaaattgctgatcgatccctacgccaaacaactggtgggcgaactg
aagtggtctgaagcgctgttcggctacaccatcggccaccccgatgccgacctcagtttt
gacgaacgcgacagcgcaccctttgtgcccaagagcaaagtcatcgaccctgcgcatacc
tggggcaatgacctgccggtacgcacgccgtgggatcgcaccatcatttacgaaacgcat
ttgcgtggtatcagcatgcgtcatccttcggtgcccgaagccgcacgcggtacctgcgcc
ggactgatggaagatgacgtgctcaagcacattcgccagttgggcgtttcgtcggtcgag
ttgttgccggtgcatgcctttgtcaacgaccagcacctgctggaaaaaggcatgaccaac
tattggggctacaacagcatcgccttcttcgcgcctgatccgcgttatctggccagcggc
aagatcgccgagttcaaggagatggttgcgcacctgcacgaggccaagctcgaggtgatt
ctggacgtggtctacaaccacaccgccgagggcaacgagcaaggtccgacgctgtcgatg
cgcggcatcgataacgcctcgtactaccggttgatgcccgacgacaaacgctactacatc
aacgattccgggaccggcaataccctggacctgagtcacccgtgcgtgctgcaaatggtc
accgactccctgcgttactgggccaccgagatgcacgtcgacggcttccgctttgatttg
gcgaccattcttggccgctatcatgagggtttcgacgagcgtcacagcttcctggtcgcc
tgccgccaggacccgatcctgcgccaggtaaaaatgatcgccgagccctgggactgcggc
cccggtggctaccaagtgggcaaattcccaccgggctggatggaatggaacgaccgattc
cgtgacaccgtgcgtgcgttctggaaaggcgacgacggacagttggcggattttgccggg
cgcatgacggcgtcgggaaatatgttcaaccagcgtgggcgccgtccttacagttcggtg
aacttcatcaccgcccatgatggcttcaccctccacgacctggtgtcctacaacgacaaa
cacaacgaagccaacgacgagaacaatcaggacggcagcaacaacaacctctcgtggaac
tgcggggttgaaggacctaccgatgatcctgaaatcaacgcattgcgcctgcgccagatg
cgcaatctgttcgccacgctgttgctggcgcaaggcacgccgatgctggtggccggcgat
gagttcgcccgtacccagcatggcaacaacaatgcctattgccaggacagtgagatcggt
tgggtcaattgggatctggatgaagacggcaaagccttgctgcagttcgtcaaacgtctg
atcaagctgcgtcaggcttacccgatcctgcgccgtgggcgtttccttgtcggcgattac
aacgaagacatcggcgttaaagatgtgacctggttggcgccggatggcaacgagatggcc
accgagcaatggcatgacagtcacggtcgctgcctgggcatgttgcttgacggccgcgcc
caggaaaccgggatccgccgcccgggtgcggatgccacgctgttgctggtggtgaatgca
caccacgacgtcgtcaacttccgcctgccaccggttccggatggcggcttctggacatgc
ctggtcgatatcaatcaaacggcggtgcgcggccaggaacgctttgactttgatcacgaa
tatgcggtgaccaaccgctcgttactgttgttcgagctgcaacaggaagacgaggtgtga
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