Pseudomonas mucidolens: NCTC8068_02781
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Entry
NCTC8068_02781 CDS
T08935
Symbol
sbcD
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pmud
Pseudomonas mucidolens
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmud03400
]
NCTC8068_02781 (sbcD)
DNA repair and recombination proteins [BR:
pmud03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC8068_02781 (sbcD)
Archaeal homologous recombinant proteins
NCTC8068_02781 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
SQH33798
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All DBs
Position
1:3108746..3109987
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AA seq
413 aa
AA seq
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MRLFHTSDWHLGQNLHGQERDFEHACFLDWLLAQLQQQRPDVLLIAGDIFDTVNPPLKAQ
ERLYDFIISAHEQNPDLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDV
ERLLIPLPDKSGAVVGWCLALPFLRPAEVTGAQLGDDYLRGIGQVHEWLIAAANAKRQPG
QALVAISHAHMAGGSVSEDSERSLIIGNAEALPASLFDASVSYVALGHLHKPQRVNGEER
IRYCGSPIPLSFSEIGYQHQILDVQLDGETLVNVEARLIPRAVNLQRLDAAPLAEILKQL
ADLPDVDLLAETQRQPWLEVRVRLDEPQPDLRQQVENALQGKAVRLVRIAAEYAGTGRNE
DHAADQLIELDQLTPQELFSRAWLENYGNAVDEQTLKDFAVLLQEVQQEAEQP
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgttccacacctccgactggcacctggggcaaaacctccacggccaggaacgc
gacttcgaacatgcctgtttcctcgactggctgctggcgcaactccagcagcagcgcccc
gacgtgctgctgatcgccggcgatatcttcgacaccgtcaacccgccgctcaaggcgcag
gagcggctgtacgacttcatcatcagcgcccacgaacaaaaccccgacttgaccatcgtg
atgatcgccggcaatcacgactccggttcacgcatcgaattgcccgcgcccttgatgcgc
cgcttgcgcacccatgcactgggtcgggtgctgtggctcgatgatgggcaactggatgtc
gagcgcctgctgattccactccctgacaagagcggtgcggtggtgggttggtgcctggcg
ctgccattcctgcggccggcggaagtcactggcgcgcagttgggcgacgattatctgcgc
ggaatcggccaagtgcatgaatggctgatcgccgccgccaatgccaagcgccagcccggc
caggcgctggttgccatcagtcatgcacacatggccggcggttcggtctcggaagactcc
gaacgcagcctgatcatcggcaatgccgaggcgctgccggccagcctgttcgatgcgagc
gtgagttatgtcgccctcgggcatttgcacaagccgcagcgggtgaatggcgaagagcgg
attcgctactgcggctcgccgattccactgtcattttccgaaatcggctaccagcaccag
attctcgatgtgcaattggacggcgaaaccctggtcaacgtcgaagctcgcctgatcccc
cgcgctgtcaacctgcagcgccttgacgccgcgccgctggccgagattctcaagcaactg
gcggacttgcccgatgtcgacctgctggcggaaacccagcgccagccgtggctggaagtg
cgggtgcggctcgacgaaccgcagcccgacctgcgccagcaagtggaaaacgccctgcaa
ggcaaggccgtgcgactggtgcggattgccgccgaatacgccggtaccggtcgcaacgaa
gaccacgccgcagaccaattgatcgagctggaccaactcacgccccaggaattgttcagc
cgtgcctggctggaaaactacggcaatgccgtcgatgaacagacgctgaaggatttcgcc
gtgctgctccaggaagtgcaacaggaggcagagcagccatga
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