Pseudomonas mucidolens: NCTC8068_02794
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Entry
NCTC8068_02794 CDS
T08935
Symbol
fadD_1
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud00061
Fatty acid biosynthesis
pmud00071
Fatty acid degradation
pmud01100
Metabolic pathways
pmud01212
Fatty acid metabolism
pmud02024
Quorum sensing
pmud04146
Peroxisome
Module
pmud_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NCTC8068_02794 (fadD_1)
00071 Fatty acid degradation
NCTC8068_02794 (fadD_1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NCTC8068_02794 (fadD_1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC8068_02794 (fadD_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pmud01004
]
NCTC8068_02794 (fadD_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmud04147
]
NCTC8068_02794 (fadD_1)
Enzymes [BR:
pmud01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NCTC8068_02794 (fadD_1)
Lipid biosynthesis proteins [BR:
pmud01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NCTC8068_02794 (fadD_1)
Exosome [BR:
pmud04147
]
Exosomal proteins
Exosomal proteins of breast milk
NCTC8068_02794 (fadD_1)
Exosomal proteins of breast cancer cells
NCTC8068_02794 (fadD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
SQH33811
LinkDB
All DBs
Position
1:complement(3131492..3133195)
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AA seq
567 aa
AA seq
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MNAVSLDQAERIWLNAYLPGVPTDIDAGIEDYPSLREVFLEHLHKYRDRVAYVSIGTEMT
YADWQAQGIAFAAWLQAQGVRKGDRVALMMPNCLQYPICLLGTILAGAVVVNVNPLYTSH
ELKHLLKDSGAETVVIFENFAHTLEKVVAGSNVKRIVIAAIGDLLGTFKGAAMNFILRSV
QKQVPPFKLPGALRFNSVLKQGRGQTHTPVSLEREELAFLQYTGGTTGDAKGVMLSHRNI
IANLLQAKAWVGDQLDQNQQETNVTLLPLYHIFSLTVNCLMFMCLGGRNILIANPRDVKR
VQMILRKERFNGIAGVNTLFNGLLENKEFCARDFSDLRLVIAGGMATHTAVAKRWKEVTG
LPIIEGYGLTECSPVVSISPIDIARMREMEFTGTIGVPLPSTWVRFVREDGELAEVGEQG
ELQVRGPQVMKGYWKRPTETAEVLDADGWFSTGDIGVMNEQGYIRLVDRKKDMILVSGFN
VYPNEIEDVVALHPGVAEVAAIGVEDGVTGEKVKIIVVRKDPSLTQEQLLVHCREYLTGY
KVPKFVEFRTEELPKTTVGKVLRRALR
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgtaagcctggaccaagcagaacgcatctggctgaacgcctacctgcccggc
gtgcccaccgacatcgacgccggcatcgaggactacccatcgttgcgcgaggtgtttctc
gagcacttgcacaagtaccgcgaccgcgtggcttacgtcagcattggcaccgaaatgacc
tacgccgactggcaggcccaaggcatcgccttcgccgcctggcttcaggcccagggtgtg
cgcaagggcgaccgtgtggccttgatgatgcccaattgcttgcagtacccgatctgcctg
ttgggcaccattctggctggcgcggtggtggtcaacgtcaacccgctgtacacctcccac
gaactcaagcacctgctcaaggacagcggcgcggaaaccgtggtgatcttcgagaacttc
gcccacaccctggaaaaagtcgtagccggcagcaacgtcaagcgcatcgtgatcgccgcc
atcggtgacttgctgggcaccttcaagggcgcggcgatgaacttcatcctgcgcagtgtg
caaaaacaggtgccgcccttcaaactgccgggggcgctgcgtttcaacagcgtacttaaa
cagggcagggggcagacgcacaccccggtgtcgctggagcgcgaagaactggccttcctg
caatacaccggcgggaccaccggcgatgccaaaggcgtgatgctcagtcaccgcaatatc
atcgccaatctgttgcaggccaaggcgtgggtcggcgaccagttggaccagaaccagcag
gaaaccaacgtcaccctgttgccgctgtaccacatcttttcgctgaccgtgaattgcctg
atgttcatgtgcctgggcgggcgcaacatcctgatcgccaacccgcgggatgtgaagcgc
gtgcagatgatcctgcgcaaggaacgtttcaacggcatcgccggcgtcaacacgctgttc
aatggtttgctggagaacaaggaattctgtgcgcgggatttttccgatctgcgcctggtc
atcgccggcggcatggcgactcataccgcggtggccaagcgctggaaggaggtcaccggt
ttgccgatcatcgagggctacggtctcacggagtgctcgccggtggtgagcatcagcccc
atcgacattgcgcggatgcgcgagatggaattcactggcaccatcggtgtgccgctgccg
tcgacctgggtgcgttttgtgcgtgaagacggcgagctggccgaggtgggcgagcagggc
gaactgcaggtacgtggtccgcaggtgatgaagggttattggaagcgcccgacggaaacc
gccgaggtgctggatgccgacggttggttttccacgggcgatatcggcgtgatgaacgag
cagggctacattcggctggtggaccgcaagaaagacatgatcctggtctcgggtttcaac
gtgtatcccaatgaaatcgaagacgtggtggcgttgcatccaggtgttgcggaagtcgcg
gcgattggcgtggaagatggggtcaccggggaaaaggtgaagatcattgtggtgcgcaag
gatccgagcctgacccaggagcaattgctcgtgcattgccgggagtatctgaccgggtac
aaggtgccgaagtttgtcgagtttcgtaccgaggaactgcccaaaaccacggtgggcaag
gtactgcgcagggccttgcgttag
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