Pseudomonas mucidolens: NCTC8068_02865
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Entry
NCTC8068_02865 CDS
T08935
Name
(GenBank) heme d1 biosynthesis protein NirL
KO
K22225
siroheme decarboxylase [EC:
4.1.1.111
]
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud00860
Porphyrin metabolism
pmud01100
Metabolic pathways
pmud01110
Biosynthesis of secondary metabolites
pmud01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
NCTC8068_02865
Enzymes [BR:
pmud01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.111 siroheme decarboxylase
NCTC8068_02865
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Motif
Pfam:
AsnC_trans_reg2
NirdL-like_HTH
HTH_Crp_2
DUF4096
Motif
Other DBs
NCBI-ProteinID:
SQH33881
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All DBs
Position
1:3203848..3204363
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AA seq
171 aa
AA seq
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MIASLDHAQLLDLRQCLERGLPRVSRPYEQLAEEIGAHPHQVLQQMRQWQEQGLFRRVGL
VLNHRALGFVANAMLVLDVPDALIDEVGQRLGCAPGISLCYQRPRRLPHWRYNLFCMVHG
RERQAVQAQIQVLLEQQLLSDLPHQLLFSTRMFKQCGGRFAPPPSQAWAHG
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgtcactcgatcacgcgcaattgctcgacctgcgccagtgcctggaacgcggt
ttgcccagggtgtcgcgaccgtatgagcagctcgccgaagaaatcggcgcccatccccat
caagtgctgcagcagatgcggcagtggcaggagcaaggcttgtttcgtcgggtcggcctg
gtactcaaccaccgagccctggggtttgtcgccaacgcgatgctggtactcgatgtaccc
gacgcgctgatcgatgaagtgggccagcgtctcggctgcgcacccggtatcagcctctgc
tatcagcgcccccgccgcctgccgcactggcgctataacctgttttgcatggtgcatggc
cgcgagcgtcaagcggtgcaggcgcagatccaggtgctgttggaacagcaactgctcagt
gacctgccgcaccaactgttgttcagcacgcgcatgttcaagcaatgcggcgggcgtttt
gcgccgccaccctcacaggcatgggcccatggatga
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