Pseudomonas mucidolens: NCTC8068_03030 Help Entry NCTC8068_03030    CDS       T08935                                  Name (GenBank) type VI secretion protein IcmF   KO K11891   type VI secretion system protein ImpL Organism pmud  Pseudomonas mucidolens Pathway pmud02025   Biofilm formation - Pseudomonas aeruginosa pmud03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:pmud00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     NCTC8068_03030  09140 Cellular Processes   09145 Cellular community - prokaryotes    02025 Biofilm formation - Pseudomonas aeruginosa     NCTC8068_03030  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:pmud02044]     NCTC8068_03030 Secretion system [BR:pmud02044]  Type VI secretion system   Imp/Vas secretion system core components    NCTC8068_03030 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  IcmF-related_N IcmF-related IcmF_C IcmF_helical AAA_29 SRC-1 RsgA_GTPase Motif Other DBs NCBI-ProteinID:  SQH34046 LinkDB All DBs Position 1:3384008..3387535 Genome browser AA seq 1175 aa AA seqDB search MKKFFKKVGTFLRKTWVWTLLLVLFVALLVWFVGPLLAVDDYKFWEGSTSRLLTISALFL IWGLTMVFVSWRAGVRKKAVEESEDGQDRIRRDEQIDEEQKELKARFKDALKTLKTSSLY RGRSERWRSDLPWYLLIGPQGSGKTSLLDFSGLEFPINKIDRKLTRDTLGTRHCDWYFAD HGVLIDTAGRYLTQPDADVDGSAWSTLLGLLRKRRRNRPLNGVLVTIPVETLLGDSEQAL EALARQVRTRLQDVHQKLHVDVPVYLVLSKADRLLGFDEFFDQLTREESDQVLGTTFRKD QSGTDVTVLRTEFEALLHRLNSQVIMRMHQERDTQRRGRILDFPHQLGQIGERLCLFVDM AFTGNRYQRVSQLRGFYLTSAPHLTTEMDATTASIGANLGMKAGVLPTLRSGRSRFIHHL LSRVIFPEADLAGADKRERNRIHWGQRALYVGALAALALFGMLWAGGFSANYERLENLRN LAQTWTQQRSALTTSDDSMAVLKPLDTSFSATQVFPKKGDVGYHERGGLYQGEDVDPVVK NTYERELEGLLLPRIATLLEGQIRANMKDRERLLNSLRAYLMLNMKDRRDGPWLKDWVAT EWSQRYTGNTTVQNGLNSHFERLLKQPFIYPLNDQLVAQARQVLRSESLANVVYRMLREQ ARNLPEYRFSQHLGPQGSLFVGTDYVIPGFYTQQGYQQYFSVKGSMLVTDILSDNWVLGE SSGISGMDLRRLMVELEQLYFRDYANYWGEAVGRIALPAINDFSDGAEQLAGLTSANSPI LQLLVEVRENTRFPMVADTADDAADTAAKLADKGGKLGKLAVAAAGKASDALVKKLPDTA KKSLQSRFESLHRLLDDNNGPTADLTPALTALNDLQMQMASLARASSPEQAAFEMAKTRM GGQRDALSNLRNASDRLPRPVSVWFNVLAEDTWRLVLSDSYRYLNQRYQSELYSFYGKAI NKRYPFSAHSTSDVAISDFREFFKAQGINDRFFETYMRPFVSGDPGNYRMRSVDGHSLPI SKVYLDQMAAAFVIRQSFFADNPAEPQVQFKLEPYTLDPVVSRSAFKFGDKTIEYRHGPI VPMSFKWPTDAEDGRTSLVLDKMVGRPLGIEKNTGPWSLFRLFDLMQTEYLTGRDVLVLK ADVGGLRANYLLTSQRTPNPFDMGVLRTFRMPVQL NT seq 3528 nt NT seq  +upstreamnt  +downstreamnt atgaaaaagtttttcaagaaagtcggcacattcttgcgcaaaacctgggtctggacgctg ctattggtgctgtttgtcgcgctgctggtgtggttcgtcgggcccctgctagccgttgac gactacaagttctgggaaggctcgacctcccgtttgctgaccattagcgcgctgttcctg atttggggcttgaccatggtctttgtcagttggcgcgcgggggtgcgcaaaaaagcggtg gaagagagcgaggacggccaggatcgaatacgccgggatgaacagatcgacgaagagcag aaggaactgaaggcacgcttcaaagacgcgctgaaaaccctgaagacgtcgagcctgtat cgcggtcgtagcgaacgctggcgcagtgatttgccgtggtacctgctgattggtccgcag ggcagcggcaaaaccagcttactggacttctcagggcttgagtttccgatcaacaagatt gatcgcaagctgacccgcgacacccttggtacccgtcattgtgactggtacttcgccgac cacggcgtgctgatcgacaccgctggccgttacttgacccagccggatgccgacgtcgat ggcagtgcctggagcacgttgctcggcctgctgcgcaagcgtcgccgcaatcgtccgctg aacggtgtactggtgaccatcccggtggaaaccctgttgggtgacagtgaacaggcgctt gaagccctggcccgccaggtgcgtacgcgcttgcaagacgtgcatcaaaagttgcacgtc gatgtgccggtttaccttgtattgagcaaggctgatcgcctgctcggttttgatgagttc ttcgaccaattgactcgcgaagaaagcgatcaggtgctcggtaccactttccgcaaggat cagagcggcactgatgtgaccgtgctacgcactgagttcgaagcattgctgcatcgcctc aacagccaggtgatcatgcgcatgcaccaagagcgtgatacccaacgccgtggccgcatc ctcgacttcccgcatcaactggggcaaatcggcgagcgtctgtgcctgttcgtcgatatg gcattcaccggcaaccgctaccagcgtgtcagccaactgcgcggtttttacctgaccagc gcaccgcatctgactacggagatggacgcaaccaccgccagcatcggcgccaacctgggc atgaaggccggcgtgttgcccacgctacgtagcgggcgttcgcgtttcatccaccatttg ctcagccgggtaattttccccgaagccgatcttgcaggcgcggacaaacgtgaacgcaat cgcatccactggggccagcgggcgctgtacgtgggcgcattggccgcactggcacttttt ggcatgctctgggcgggcggtttctccgcgaattacgagcgcctggaaaacctgcgcaac ctggcacaaacctggacccagcagcgctcggccctcaccaccagtgatgattccatggca gtactcaaacccctagacactagcttttcggcgactcaggtgttcccgaaaaaaggtgat gtaggttaccacgagcgcggcggcctgtatcagggtgaagacgttgatccagtggtaaag aacacctatgaacgcgagcttgaagggctgctattgccacggatcgcgacactgctcgaa gggcagattcgcgccaacatgaaagaccgcgagcgcctgctcaacagcctgcgtgcgtac ctgatgctgaatatgaaggatcgccgcgacgggccatggctcaaggactgggttgccacc gaatggtcccagcgttacaccggcaacaccactgtgcaaaacggcttgaacagccacttc gagcgcttgctaaaacagccgtttatctatccgcttaatgatcagttggtggctcaggcg cgtcaggttttacgcagtgagtccctggctaacgtggtatatcggatgctgcgcgagcag gctcgtaacctgccggaataccgttttagccaacatcttggtccacaggggtcgctgttt gttggcaccgattacgtgatcccggggttctacacccaacagggctatcaacagtatttt tcggttaagggctcgatgctggtcaccgatatcctgagtgacaactgggtactgggtgaa agctcaggtatcagtggtatggacttacgtcgcctgatggtcgaactcgagcagctgtat tttcgcgactacgccaactactggggtgaagcggtgggccggatcgcgctgccggccatc aacgactttagtgacggcgccgagcaattggcgggcctgacatctgctaattcgccgatc ctgcaactactagtggaagtgcgtgaaaacacgcggttcccaatggtcgctgacacggca gatgacgccgccgatacggcagcgaaactggcagacaagggcggtaagctcggaaaactg gcggtcgctgcagcgggtaaggcgtctgacgccttggtgaaaaagctgccggataccgcg aagaagtccctacaaagtcgctttgagtcgctgcaccgcttgctggatgacaacaacggc ccaaccgctgacctgaccccagccctgaccgccctcaacgacctgcaaatgcagatggcc agcctggcccgtgccagttcgccagagcaagccgcgttcgaaatggccaagacccgcatg ggtggccagcgtgatgctctgagcaacctgcgcaatgcgtcggaccgtctaccgcgtccg gtgagtgtgtggttcaacgtattggctgaagatacctggcgtctggtactcagcgattct tatcgatatctgaatcagcgctatcagagtgagctgtacagcttctacggcaaagcgatc aacaagcgttacccgttcagcgcccacagcaccagcgacgttgcgatcagcgacttccgc gagttcttcaaggcccagggcatcaacgatcgcttcttcgagacgtacatgcgtccgttt gtcagcggtgatccgggtaactaccgcatgcgcagcgtcgatggtcacagtctgccgatt tccaaggtctacctggatcagatggccgccgcgttcgtgatccgccagagcttctttgcc gacaacccggccgagcctcaggtgcagttcaaactggaaccttacaccctcgacccggtt gtcagccgttccgcgttcaagtttggcgacaagaccatcgaataccgtcatggccccata gtgccgatgtcattcaaatggccaaccgacgctgaagacgggcgtaccagcctggtgctc gacaaaatggtcggccgcccgctgggtatcgagaagaacactggcccgtggtcgctattc cgtctgtttgatttgatgcaaaccgaatacctgaccggccgtgacgtgctggtgctcaag gctgacgtagggggtctacgcgccaactacttactaaccagccagcgcacgccaaacccg ttcgacatgggcgtattgcgtaccttccgcatgccagtacagctctga

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