Pseudomonas mucidolens: NCTC8068_03096
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Entry
NCTC8068_03096 CDS
T08935
Symbol
acoR_1
Name
(GenBank) sigma-54 dependent transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pmud
Pseudomonas mucidolens
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmud03000
]
NCTC8068_03096 (acoR_1)
Transcription factors [BR:
pmud03000
]
Prokaryotic type
Helix-turn-helix
Other families
NCTC8068_03096 (acoR_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_30
MimR_N
AAA_5
nSTAND6
PAS
AAA_2
AAA
HTH_7
AAA_3
AAA_7
HTH_23
AAA_16
HTH_22
HTH_psq
Mg_chelatase
HTH_20
HTH_10
nSTAND3
DUF2089
HTH_11
MCM
HTH_Tnp_1
HTH_28
AAA_14
Motif
Other DBs
NCBI-ProteinID:
SQH34111
LinkDB
All DBs
Position
1:3450699..3452528
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AA seq
609 aa
AA seq
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MAAPAPLLAHDTIIQDSWRRCRAFGLDHQSTPSFDQLPADGISQLLERHHSLVQTTHQEV
LPYYENILSNSNCLIMLADHQGQVLTSWGTQRFIEPKLARGFSAGASWLERSTGTNAIGT
ALACAQAVHIEHDEHFLKANRFMTGSAAPIVDAHREIIAVLDVSSDSYLPPSHTLGMVKM
MSQTVENRLILNLFGGEHFQLTFNTGLNNLDSQWAGLLIFDESGQVLSANRRADNLLGIS
LSRVMIDSLFKVSLLELLNQPEGLPFALQAAGRNRFQCLLKRPKQTPIQARVFAQPTPAA
PAAINLNTLHFGDSRVEKAVRQAERLLEKDIPLLIHGETGVGKEVFVKALHQASSRSQQA
FIAVNCAAIPAELVESELFGYEKGAFTGANQKGSIGLIRKADKGTLFLDEIGDMPLPTQA
RLLRVLQERCVQPVGSSELFAVDLRIISATNRSLREQVQIGRFREDLYYRIGGLTLELPP
LRERSDKQALFKQLWQQHRDPTQWAGLSAEVLALFEQHPWPGNLRQVSSVMQVALAMAEE
QPIRAEHLPDDFFIDLGQRPPQPRVHHETPEELQDLNQRLEAVGGNISHLARELGVSRNT
LYKRLRETT
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggccgcacccgctcccctgctggcgcacgacaccatcatccaggactcctggcgccgc
tgccgcgccttcggcctggatcaccagagcacgcccagcttcgatcaactgcccgccgac
ggcatcagccagctgctggagcgccaccactccctggtgcagaccactcaccaggaagtc
ctgccctattacgagaacatcctcagcaactccaattgcctgatcatgttggccgatcat
cagggccaggtcttgacctcctggggcacccagcggtttatcgagccaaagctggcccgg
ggtttcagcgccggggccagctggctggagcgctcgaccggcaccaacgccatcggcacc
gccctggcttgcgcgcaggcggtgcatatcgaacacgatgaacacttcctcaaggccaac
cgcttcatgaccgggtcggcggcaccgatcgttgatgcccaccgcgaaatcatcgccgtg
ctggatgtgtccagcgacagctatctgccgccctcccataccttgggcatggtcaagatg
atgagccagaccgtggaaaaccggctgattctcaacctgtttggcggcgagcatttccaa
ctgaccttcaataccgggctgaacaacctcgacagccaatgggctggcctgctgatcttc
gatgaaagcggccaggtgttatcggccaaccgacgcgccgataatttgctgggcatcagc
ctgtcgcgggtgatgatcgacagtttgttcaaagtgtcgttgctggaactgctcaatcaa
cccgaaggtttgccgttcgcactgcaggccgctgggcgcaatcgctttcaatgtttgttg
aaacggcctaaacaaacaccgatccaggcgcgggtctttgcgcaaccaacacctgccgcc
cccgcagccatcaacctcaacaccctgcattttggcgacagccgcgtggaaaaagccgtg
cgccaggccgagcggttgctggaaaaagacatcccgttgctgatccacggtgaaactgga
gtaggcaaggaagttttcgtcaaagccctgcaccaggccagttcccgcagccaacaagca
tttatcgccgtcaactgcgcggccattcccgcagaactggtggaatcggagttgtttggc
tacgaaaaaggcgccttcaccggcgccaatcagaaaggcagcatcggcctgatccgcaag
gccgacaagggcacgctgtttcttgacgaaatcggcgacatgcctttgcccacccaggct
cggctgttgcgcgtattgcaggagcgttgcgtgcaaccggtgggcagcagcgaattgttt
gcagtggacctgcgcatcatctcggccaccaaccgttcgttgcgcgaacaagtacagatc
ggacgcttccgtgaggatttgtactaccgcatcggcggcctgaccctggagctgccacct
ttacgcgagcgcagcgacaagcaggcattgttcaagcagctctggcaacagcatcgcgat
cccacgcaatgggccggactcagcgccgaagtgttggcgttgtttgagcagcatccgtgg
ccgggcaacttgcggcaggtcagcagcgtgatgcaggtcgccctggccatggccgaagag
cagccgattcgtgcggagcatttgccggatgattttttcatcgacctgggacaacgccca
ccgcaaccccgcgtgcaccacgagacgccagaagagcttcaagacctgaatcaaagactg
gaggcggtcggtggcaatatctcgcatttggcacgggagttgggcgtgagtcgcaacacc
ctgtacaagcgattacgcgagactacatag
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