Pseudomonas mucidolens: NCTC8068_03204
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Entry
NCTC8068_03204 CDS
T08935
Symbol
bkdC
Name
(GenBank) 2-oxoisovalerate dehydrogenase E3 component, dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud00010
Glycolysis / Gluconeogenesis
pmud00020
Citrate cycle (TCA cycle)
pmud00260
Glycine, serine and threonine metabolism
pmud00280
Valine, leucine and isoleucine degradation
pmud00310
Lysine degradation
pmud00380
Tryptophan metabolism
pmud00620
Pyruvate metabolism
pmud00630
Glyoxylate and dicarboxylate metabolism
pmud00640
Propanoate metabolism
pmud00670
One carbon pool by folate
pmud00785
Lipoic acid metabolism
pmud01100
Metabolic pathways
pmud01110
Biosynthesis of secondary metabolites
pmud01120
Microbial metabolism in diverse environments
pmud01200
Carbon metabolism
pmud01210
2-Oxocarboxylic acid metabolism
pmud01240
Biosynthesis of cofactors
Module
pmud_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pmud_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pmud_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
pmud_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pmud_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
NCTC8068_03204 (bkdC)
00020 Citrate cycle (TCA cycle)
NCTC8068_03204 (bkdC)
00620 Pyruvate metabolism
NCTC8068_03204 (bkdC)
00630 Glyoxylate and dicarboxylate metabolism
NCTC8068_03204 (bkdC)
00640 Propanoate metabolism
NCTC8068_03204 (bkdC)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NCTC8068_03204 (bkdC)
00280 Valine, leucine and isoleucine degradation
NCTC8068_03204 (bkdC)
00310 Lysine degradation
NCTC8068_03204 (bkdC)
00380 Tryptophan metabolism
NCTC8068_03204 (bkdC)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NCTC8068_03204 (bkdC)
00670 One carbon pool by folate
NCTC8068_03204 (bkdC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmud04147
]
NCTC8068_03204 (bkdC)
Enzymes [BR:
pmud01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
NCTC8068_03204 (bkdC)
Exosome [BR:
pmud04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
NCTC8068_03204 (bkdC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
HI0933_like
GIDA
FAD_oxidored
FAD_binding_3
FAD_binding_2
NAD_binding_8
DAO
MCM_bind
UDPG_MGDP_dh_N
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
SQH34213
LinkDB
All DBs
Position
1:3584751..3586130
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AA seq
459 aa
AA seq
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MAQTLNTTLLIIGGGPGGYVAAIRAGQLGIPTILVEGQALGGTCLNIGCIPSKALIHVAE
QFQQTVHHSQGSALGIEVDVPTLDIRKSVEWKDSIVDRLTTGVAALLKKHNVQVIHGWAK
VIDGKSVAVGDQRIQCEHLLLATGSKSVDLPMLPIGAAVISSTEALAPTRVPKRLIVVGG
GYIGLELGIAYRKLGAEVSVVEAQDRILPAYDAELTQPVAQSLKQLGLTLYLKHSVSGFQ
DNCLQVRDPNGDTLALDADQVLVAVGRKPNTQGWNLEALNLEMNGAAIKIDNRCQTSMRN
VWAIGDLSGEPMLAHRAMAQGEMVAELISGKHREFNPAAIPAVCFTDPELVVVGKTPDEA
KAAGLDCIVASFPFAANGRAMTLESKSGFVRVVARRDNHLILGWQAVGAGVSELSTAFGL
SLEMGSRLEDVAGTIHAHPTLGEAVQEAALRALGHALHL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagacattgaataccacgctgctgattatcggcggcggcccgggcggttatgtg
gcggcgattcgtgccggccaactgggcatcccgaccattctggtggaaggtcaggcgctg
ggcggcacctgcctgaatatcggctgcattccgtccaaggcactgattcatgtggccgag
cagttccagcaaaccgtgcatcacagccagggctcggcgctggggattgaagtcgacgtc
cccacgctggacatccgcaaaagcgtggaatggaaggatagcatcgttgatcgcctgacc
accggcgtcgccgcgttgttgaaaaaacacaacgtgcaggtgattcacggctgggccaag
gtcatcgacggcaagagcgtggcggtgggcgatcagcgcatccagtgcgagcacttgttg
ctcgccactggctcgaaaagcgtcgatctgccgatgctaccgattggcgcagcggtgatt
tcctctaccgaggcactggcgccaacacgcgtgcccaaacggctgatcgtggtcggcgga
ggttatatcgggctggagctggggatcgcctatcgcaagctcggcgccgaagtcagcgtg
gtggaagcgcaagaccgcatcctgccggcctacgacgccgaactgacgcaaccggtggcg
caatctctcaagcagttggggctcacgctgtacctcaagcacagcgtcagcggttttcaa
gacaattgcctgcaggtccgcgaccccaacggcgacaccctggcgctggacgccgatcaa
gtgctggtggctgtcgggcgcaaacccaacactcaaggctggaatcttgaagccttgaac
ctggaaatgaacggtgcggcgatcaagatcgacaaccgctgccagaccagcatgcgtaac
gtctgggcgattggcgacctgagcggcgaaccgatgctcgcgcatcgggcgatggcccag
ggcgagatggtcgcggagctgatcagcggcaagcaccgggaattcaacccggcagcgatt
ccggcggtgtgctttaccgatccggaactggtggtggtcggcaagaccccggacgaagcc
aaggccgcggggctggactgtatcgtggcgagtttcccattcgccgcgaacggccgggcc
atgacgctggaatcgaaaagcggttttgtgcgggtggtggcacggcgtgacaatcacctg
attctcggctggcaggcggtaggcgctggcgtctcggaactgtccacggcgtttggcctg
agcctggagatgggttcgcggctggaagacgtggcgggcaccattcatgcgcatcccacc
ctgggcgaagccgtccaggaagccgccctgcgcgcattgggccacgccctgcatctgtaa
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