KEGG   Pseudomonas mucidolens: NCTC8068_03226
Entry
NCTC8068_03226    CDS       T08935                                 
Symbol
cynR_3
Name
(GenBank) LysR family transcriptional regulator
  KO
K17737  LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pmud  Pseudomonas mucidolens
Brite
KEGG Orthology (KO) [BR:pmud00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pmud03000]
    NCTC8068_03226 (cynR_3)
Transcription factors [BR:pmud03000]
 Prokaryotic type
  Helix-turn-helix
   LysR family
    NCTC8068_03226 (cynR_3)
SSDB
Motif
Pfam: LysR_substrate HTH_1 MarR_2 HTH_23 HTH_20 DExH14_plug
Other DBs
NCBI-ProteinID: SQH34235
LinkDB
Position
1:complement(3609501..3610406)
AA seq 301 aa
MTVKQIRAFLAVAQSLSFAAACERLHLSQSALSLTIKGLEEGLGGRLFSRNTRNVALTPE
GESLLPLARRLIADWDNAEDELRQRFTLQRGRVTVAAMPSFAGNVLPPILKVFRARFPQV
NVTVQDLINEHVLEMVRDRHVELGVAFEPAPGSSLQFTPLYLDRFIAVVPGDSPLAQMAE
IDWKTLLTQPFITLQRPSTVRVMLEEHLGALGMKLPVALESHQLATVGKMVASGLGVSAV
PALCARQMEEAGGRCITLTDPVIERPIGVLTKPGHELSAAAQALFDIFCDEVGKGRFPVV
P
NT seq 906 nt   +upstreamnt  +downstreamnt
atgactgtaaaacagatacgcgccttccttgccgtggcccagagcctgagttttgctgcc
gcgtgtgagcgcctgcatttgtcacagtcagccctgagcctgaccatcaaaggcctggaa
gaagggctgggtggacggttgttcagccgcaatacccgcaacgtggcgctgacgcccgag
ggcgaatccctgttgcccctggcccgacgcctgattgccgactgggacaacgccgaggac
gaactgcgccagcgttttaccctgcaacgcgggcgcgtgacggtggcggcaatgccctcg
tttgccggtaatgtgttaccaccgatcctgaaggtgtttcgtgcgcgttttccccaggtc
aacgtgactgtgcaggacttgatcaatgaacacgtgctggaaatggtccgggatcggcat
gtagaactgggtgtcgcgttcgaacccgcgcccggctcgtccttgcagttcaccccctta
tacctggatcgctttatcgccgtggtgccgggagattcccccttggcgcagatggctgaa
atcgactggaaaaccttactgacgcagcccttcatcaccttgcagcgaccttccaccgta
cgggtgatgctggaggagcacctgggcgccttgggcatgaagctgccggtagccctggaa
agccatcaactggcaacggtgggcaaaatggtcgccagtgggttgggtgtcagtgctgta
ccggcgttgtgcgcgcggcagatggaggaggcgggtggccgttgcatcaccttgacggat
ccggtgatcgaacgacctattggggtgctgaccaagccgggtcatgaattgtcggcagcg
gcccaggccttgtttgatattttttgcgatgaggtcggcaaaggccgatttcccgtagtg
ccttga

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