Pseudomonas mucidolens: NCTC8068_03522
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Entry
NCTC8068_03522 CDS
T08935
Symbol
ygdH_1
Name
(GenBank) lysine decarboxylase
KO
K06966
pyrimidine/purine-5'-nucleotide nucleosidase [EC:
3.2.2.10
3.2.2.-]
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud00230
Purine metabolism
pmud00240
Pyrimidine metabolism
pmud01100
Metabolic pathways
pmud01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
NCTC8068_03522 (ygdH_1)
00240 Pyrimidine metabolism
NCTC8068_03522 (ygdH_1)
Enzymes [BR:
pmud01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.10 pyrimidine-5'-nucleotide nucleosidase
NCTC8068_03522 (ygdH_1)
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Gene cluster
GFIT
Motif
Pfam:
PpnN_C
DUF4478
Lysine_decarbox
LDcluster4
Motif
Other DBs
NCBI-ProteinID:
SQH34522
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All DBs
Position
1:3925206..3926579
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AA seq
457 aa
AA seq
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MPQRHVINASVSPKGSLETLSQREVQQLSEAGTGSIYTLFRQCALAILNTGAHIDNAKTI
LDAYKDFEVRIHQQDRGVRLELLNAPADAFVDGEMIASTREMLFSALRDIVYTENELDSQ
RIDLSNSQGITDYVFHLLRNARTLRPGVEPKIVVCWGGHSINTEEYKYTKKVGHELGLRS
LDVCTGCGPGVMKGPMKGATISHAKQRITGGRYLGLTEPGIIAAEAPNPIVNELVILPDI
EKRLEAFVRVGHGIIIFPGGAGTAEEFLYLLGILMHPDNRDVPFPVILTGPQQAAPYLQQ
LHAFVGATLGEEAQAHYQIIIDDPAEVARQMTAGLKTVKQFRRERNDAFHFNWLLKIDEG
FQRPFDPTHENMAGLQLSHDLPPHELAANLRRAFSGIVAGNVKDKGIRLIEQKGPYEING
DPSIMKPLDELLKAFVAQHRMKLPGGAAYVPCYRVVQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgccacaacgacacgtcatcaacgcctccgtcagccctaaaggcagtctcgaaacgctg
tctcaacgtgaagtccagcagctcagcgaagccggaaccggcagcatttacaccctgttc
cgccagtgcgccctggccatcctcaacaccggcgcgcatatcgataacgccaagaccatc
ctcgatgcctacaaagacttcgaagtgcggatccaccagcaggatcgcggcgtacgcctg
gaactgttgaacgcacccgccgacgcattcgtggatggggaaatgatcgccagcacccgc
gagatgctgttcagcgctctgcgcgacattgtctataccgaaaacgaactggacagccag
cgtatcgacctgagcaactcccaaggcatcactgactacgtgttccacctgctgcgcaat
gcccgcaccctgcgcccgggcgtcgagccgaaaatcgtggtgtgctggggcgggcactcg
atcaataccgaagaatacaaatacaccaagaaagtcggccacgaactgggcctgcgcagc
ctcgacgtctgcaccggttgcggtcccggggtgatgaaaggcccgatgaagggcgcgacc
atttcccacgccaagcaacggatcaccggcgggcgctacctgggtctgaccgagccgggc
atcatcgccgccgaagcgcccaatccgatcgtcaacgaactggtgatcctgccagacatc
gaaaaacgcctggaagccttcgtacgtgttggccacggcatcattatcttcccgggcggc
gccggcacggccgaagagttcctgtacctgctgggcatcctgatgcatccggataaccgg
gacgtgccctttccggtcatcctcaccgggccgcaacaagccgcgccgtatctgcaacag
ctgcacgcgtttgtcggcgcaaccttgggtgaagaggcgcaagcccactatcagatcatt
atcgatgacccggctgaagtcgcccgtcaaatgactgccggcttgaaaaccgtcaaacag
tttcgccgcgagcgcaacgacgcattccatttcaactggttgctcaagatcgatgaaggt
ttccagcggccgttcgatccgactcacgaaaacatggccggcctgcaactgagccacgac
ctgccccctcacgaactggcggccaacctacgccgggcgttctcggggatcgtggcgggt
aacgtcaaggacaagggcattcggttgatcgaacagaaagggccatatgagatcaatggc
gacccgagcatcatgaagccactggacgaactgctgaaggcgtttgtggcgcagcaccgg
atgaagttgccgggtggcgcagcctatgtgccgtgctatcgcgtcgtgcagtga
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