Pseudomonas mucidolens: NCTC8068_03865
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Entry
NCTC8068_03865 CDS
T08935
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pmud
Pseudomonas mucidolens
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmud03009
]
NCTC8068_03865 (rumA)
Enzymes [BR:
pmud01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
NCTC8068_03865 (rumA)
Ribosome biogenesis [BR:
pmud03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NCTC8068_03865 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
PCMT
Cons_hypoth95
TRAM
MTS
Methyltransf_23
Methyltransf_11
Methyltransf_15
RrnaAD
TRM5-TYW2_MTfase
Methyltr_RsmB-F
Ubie_methyltran
TPMT
DREV
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
SQH35004
LinkDB
All DBs
Position
1:complement(4261813..4263165)
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AA seq
450 aa
AA seq
DB search
MAKQERGLRFQPAGGSRAPQIPVGKKQRLSIERLANDGRGIVFFEGRTWFVVGALAGEEV
EARVLGAHGKVVEARTERVFKASALRRATPCAHAGRCGGCSLQHLPHNEQLALKQRMLAE
QLSRVAGIEPQEWAAPLSGPEFGYRRRARVAVRWDAKARHLDVGFRAVASQDIVAIDDCP
VLVQALQPIMQRLPNMLRRLGKPQALGHVELFSGSSIALLLRHMAPLSDADLVILNEFCT
FHDAQLWLHGEGEPQPFAPDQALGYRLEQWDLELAYRPGDFVQVNAGVNEAMVAQALEWL
ALKSDERVLDLFCGLGNFALPLARQVREVVAVEGVQAMVARAAQNALSNNLPNVQFFQAD
LSQTLTDAEWAKAGFSAVLLDPPRDGALEVVRKLATLGADRLVYVSCNPATLARDTVELV
KQGYRLKRAGILDMFPQTAHVEAMALFEAS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcaagagagaggcctgcgcttccaaccagcgggcggtagccgggcgccacaa
atccccgtaggcaaaaaacagcgcctgagcatcgagcgcctggccaacgacgggcgcggc
attgtgttcttcgagggccgcacctggtttgtcgtgggcgcgctggccggtgaagaagtc
gaggcgcgggtgttgggtgcccatggcaaagtcgtcgaggcacgcaccgagcgggtgttc
aaggccagcgcactgcggcgcgcgacgccttgcgcacacgcgggccgctgtggtggttgc
agcctgcaacacttgccccacaacgaacagctcgctctgaaacagcgcatgttggccgag
cagttgtcccgagtcgccggtatcgaaccccaggaatgggccgcgccgttgagcgggccg
gaattcggctatcgccgccgggcccgggtcgccgtgcgttgggatgccaaggccaggcac
cttgacgtcggcttccgggccgtcgccagtcaggacatcgtcgccatcgacgattgcccg
gtactggtacaggccttgcaaccgatcatgcaacgtttgccgaacatgctgcggcgcctc
ggcaaacctcaggcgctgggccatgtggaactgttcagcgggtcgtcgattgccctgcta
ctgcggcacatggcgccgctgtctgacgcggacctggtgatcctgaacgaattctgcacc
ttccatgatgcccaactgtggctgcatggcgaaggcgagccgcaacccttcgctccagat
caggccttgggttatcgccttgaacagtgggatctggagctggcgtatcggcccggggac
tttgtgcaggtcaacgccggcgttaacgaggcgatggtcgcccaggcgctcgagtggttg
gcgctgaaatccgatgagcgggtgctggatctgttttgtggcttgggcaactttgccttg
ccgctggcccgccaggtacgcgaagtcgttgcggttgaaggtgtgcaggcgatggtggcg
cgggcggcgcagaatgcgctcagcaacaatttgcccaatgtgcagtttttccaggctgac
ttgtctcagactttgactgatgcggaatgggccaaagcgggcttttctgcggtactcttg
gacccaccccgcgatggtgccctggaggttgtgcgcaagctcgccactctgggggccgat
cgcctggtatatgtgtcctgcaatccagccacgctggcgcgggacacagtcgagttggtc
aagcaaggctaccggctaaagcgtgccgggatcctcgatatgtttccgcaaacggcccat
gtcgaggcgatggcgttatttgaagcgagctag
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