Pseudomonas mucidolens: NCTC8068_03888
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Entry
NCTC8068_03888 CDS
T08935
Symbol
frc_6
Name
(GenBank) putative racemase
KO
K01796
alpha-methylacyl-CoA racemase [EC:
5.1.99.4
]
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud00984
Steroid degradation
pmud01100
Metabolic pathways
pmud01120
Microbial metabolism in diverse environments
pmud04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00984 Steroid degradation
NCTC8068_03888 (frc_6)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NCTC8068_03888 (frc_6)
Enzymes [BR:
pmud01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.99 Acting on other compounds
5.1.99.4 alpha-methylacyl-CoA racemase
NCTC8068_03888 (frc_6)
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GFIT
Motif
Pfam:
CoA_transf_3
Motif
Other DBs
NCBI-ProteinID:
SQH35034
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All DBs
Position
1:complement(4281412..4282593)
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AA seq
393 aa
AA seq
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MSGPLASLKVLDFSTLLPGPFASLLLADMGAEVLRIESPVRIDLLRVLPPHDRGVSASHA
YLNRNKRSLALDLKQPQALDIVRQLVKDYDIVLEQFRPGVMERLGLGYEALKAINPKLIY
VSITGYGQTGPYKDRAGHDINYLALSGVASYTGRRDSGPLPLGVQVADVGGGSLHAVVGL
LAAVIARQQSGVGQYLDVSMTDCAFSLHAMAGAAYLACGVEPEMENQVLNGGSFYDYYRS
RDGRWWSVGSLEPAFMQQLCTALGRPELAAQGLSLEPERQQALKQALQIEFEKHSFEELC
RLFAAVDACVEPVLSLGEALEHPQLKARDLLHQVPREDGSFQAQMACPLKFSAGLPAPRH
IGVALGAHSDEVLGELGFSAQRIAQLRGAKVVG
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtcccttggcgtccctcaaagtgctggatttctcgaccttgctgcctggcccg
ttcgcctcgctgctgttggcggacatgggcgccgaggtgctgcgcatcgaatcccccgtg
cgcatcgacctgttgcgtgtattgccgccgcatgaccgtggcgtatcggccagtcacgct
tatctcaatcgcaacaagcgcagcctggcgcttgacctcaagcagccgcaagcgctggac
atcgtccggcaactggtgaaggactacgacatcgtccttgaacagtttcgacccggtgtc
atggagcgtctgggcctggggtatgaggcgctgaaggcgatcaatccgaagctgatttac
gtctccatcaccggttacggccagacgggtccttataaggatcgcgccggtcacgacatc
aattacctggcgttgtccggcgtggccagttacaccggacgacgggacagcggcccgttg
cctttgggcgtgcaagtggcggatgtgggtggcggctcgctgcacgcggtggtcggcctg
ctggcggcggtgatcgcacggcaacaaagcggggtgggccagtatctggatgtgagcatg
accgactgtgcatttagcttgcatgccatggcgggcgctgcctacctggcttgcggtgtg
gagccggagatggaaaaccaggtgctcaatggcggcagcttttatgactattaccgctcg
cgggacgggcgttggtggtcggtgggcagcctggagccggcttttatgcagcaattatgt
acggcgttggggcgtccggagctggcggcccaaggcttgtcgcttgagcccgagcgacag
caggcgctgaagcaggcgttgcagattgagtttgagaagcacagctttgaggaactatgc
cgattgtttgccgcggtggacgcctgcgtcgagccggtgctcagcctgggtgaagcgctt
gagcatccacaactcaaagcccgggacctgctccaccaggtgccgcgtgaggacggttca
ttccaggcgcagatggcctgtccgctgaagttttcagcaggcctgccagcgccaaggcat
ataggcgtggcgttgggcgcccacagtgacgaggtgctgggcgaactggggttcagtgct
cagcggatagcccagttgcggggggccaaagtggtggggtag
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