Pseudomonas mucidolens: NCTC8068_04298
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Entry
NCTC8068_04298 CDS
T08935
Symbol
hupB_1
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pmud
Pseudomonas mucidolens
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmud03032
]
NCTC8068_04298 (hupB_1)
03036 Chromosome and associated proteins [BR:
pmud03036
]
NCTC8068_04298 (hupB_1)
03400 DNA repair and recombination proteins [BR:
pmud03400
]
NCTC8068_04298 (hupB_1)
DNA replication proteins [BR:
pmud03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NCTC8068_04298 (hupB_1)
Chromosome and associated proteins [BR:
pmud03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NCTC8068_04298 (hupB_1)
DNA repair and recombination proteins [BR:
pmud03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NCTC8068_04298 (hupB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HTH_IclR
SSPI
Motif
Other DBs
NCBI-ProteinID:
SQH35747
LinkDB
All DBs
Position
1:complement(4692743..4693024)
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AA seq
93 aa
AA seq
DB search
MAITKDQLIADLAEAVDAPKTTVRALLDQLGQIVADQLENGGEITLPGVGKLKVTERPAR
TGRNPSTGAAIEIAAKKVIKLVVAKGLTDSINK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggctattactaaagaccaactgatcgctgacttggctgaagctgtagacgcacctaaa
accaccgtgcgtgctctgctggaccaactgggccagatcgttgctgatcagctggaaaat
ggcggcgaaatcactctgccaggcgttggcaagctgaaagtgaccgagcgtcctgcccgt
actggccgtaacccttcgactggcgctgccatcgaaatcgctgccaagaaagtgatcaag
ctggttgtggccaaaggcctgaccgactcgatcaacaagtaa
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