Pseudomonas mucidolens: NCTC8068_04485
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Entry
NCTC8068_04485 CDS
T08935
Symbol
ldc
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud00330
Arginine and proline metabolism
pmud00480
Glutathione metabolism
pmud01100
Metabolic pathways
pmud01110
Biosynthesis of secondary metabolites
pmud04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
NCTC8068_04485 (ldc)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
NCTC8068_04485 (ldc)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
NCTC8068_04485 (ldc)
Enzymes [BR:
pmud01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
NCTC8068_04485 (ldc)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
SQH36084
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All DBs
Position
1:4879899..4881062
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AA seq
387 aa
AA seq
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MSINVEDYFARATFDKMKAFADKQETPFVVIDTAMISQAYDDLRAGFEFAKVYYAVKANP
AVEIIDLLKDKGSSFDIASIYELDKVMERGVSADRISYGNTIKKSRDIRYFYEKGVRLFS
TDSEADLRNIAKAAPGSKVYVRILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVP
YGISFHVGSQQRDISVWDAAIAKVKVIFERLKEEDGIHLKLINMGGGFPANYITRTNTLE
TYAEEIIRFLKEDFGDDLPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVG
KFSGLIETMDEAIKFPIWTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLY
WLSTGAYTTSYSAVEFNGFPPLKSFYV
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcaacgtcgaagattatttcgcgcgcgccacctttgacaaaatgaaggcgttc
gccgacaagcaagaaaccccgttcgtggtcatcgacaccgcgatgatcagccaggcctac
gatgacctgcgcgccggtttcgaattcgccaaggtgtactacgcggtcaaggccaatccg
gccgtcgaaatcattgacctgctgaaagacaaaggttcgagctttgacatcgcctccatc
tacgagttggacaaggtgatggagcgtggcgtcagcgccgaccgtatcagctacggcaac
accatcaagaaatccagggacatccgctacttctacgagaagggcgtgcgcctgttctcc
accgactccgaagccgacctgcgcaacatcgccaaggccgcgccgggctcgaaagtgtac
gtgcgtatcctcaccgaaggctcgaccacggctgactggcctttgtcgcgcaaattcggt
tgccagaccgacatggcgatggacctgctgatcctggcccgcgacctgggcctggtgcct
tacggcatctcgttccacgtcggctcgcaacagcgcgacatcagcgtctgggacgccgcc
atcgccaaggtcaaagtgatcttcgagcgcctgaaagaagaagacggcatccacctgaag
ctgatcaacatgggcggcggcttcccggccaactacatcacccgcaccaacaccctggaa
acctacgccgaggaaatcatccgcttcctcaaggaagacttcggtgacgacctgccggaa
atcatcctggaaccgggccgttcgttgattgccaacgccggtatcctggtcagtgaagtg
gtgctggtggcgcgtaaatcccgcaccgccgtcgagcgctgggtgtacacggatgtgggc
aagttctccggcctgatcgaaaccatggacgaagccatcaagttcccgatctggaccgag
aagaaaggcgagatggaagaagtggtcatcgccggtcctacctgtgacagcgccgacatc
atgtacgaaaactacaagtacggtctgccgctgaacctggccatcggtgatcgtctgtac
tggttgtccaccggcgcctacaccaccagctacagcgcagtcgaattcaacggcttcccg
ccgctgaaatccttctacgtataa
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