Pseudomonas mucidolens: NCTC8068_04556
Help
Entry
NCTC8068_04556 CDS
T08935
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud00260
Glycine, serine and threonine metabolism
pmud00460
Cyanoamino acid metabolism
pmud00630
Glyoxylate and dicarboxylate metabolism
pmud00670
One carbon pool by folate
pmud00680
Methane metabolism
pmud01100
Metabolic pathways
pmud01110
Biosynthesis of secondary metabolites
pmud01120
Microbial metabolism in diverse environments
pmud01200
Carbon metabolism
pmud01230
Biosynthesis of amino acids
pmud01240
Biosynthesis of cofactors
pmud04981
Folate transport and metabolism
Module
pmud_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NCTC8068_04556 (glyA)
09102 Energy metabolism
00680 Methane metabolism
NCTC8068_04556 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NCTC8068_04556 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NCTC8068_04556 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NCTC8068_04556 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NCTC8068_04556 (glyA)
Enzymes [BR:
pmud01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NCTC8068_04556 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
SQH36198
LinkDB
All DBs
Position
1:4955061..4956314
Genome browser
AA seq
417 aa
AA seq
DB search
MFSRDLTIAKYDADLFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEFVDVVEQLAIDRAKELFGADYANVQPHAGSQANAAVYLALLQGGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGIDANGLIDYDEVERLAVEHKPKMIVAGFSAYSQI
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARANAEIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKTYQQQVVKNAQVMASV
FIERGFDVVSGGTENHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactattgccaagtacgacgccgatctctttgccgccatggag
caagaagctcagcgccaggaagagcacattgagctgatcgcttcggaaaactacaccagc
cctgcggtaatggaggctcaaggttcggttctgaccaacaaatacgccgaaggttatccg
ggcaagcgttactacggcggttgcgagttcgtcgacgtcgttgaacaactggccatcgac
cgcgccaaggaactgttcggcgccgattacgccaacgtccagccacacgccggctcccaa
gccaacgcagccgtgtacctggccctgctgcaaggtggcgacaccatcctgggcatgagc
ctggcccacggtggtcacctgacccacggcgccagtgtttcctcctccggcaagctgtac
aacgccgttcaatacggtatcgatgccaacggcctgatcgactacgacgaagtcgagcgc
ctggcggtcgagcacaagccaaaaatgatcgtggccggtttctctgcctactcgcagatc
ctcgacttcccacgtttccgcgctattgccgacaaagtgggcgcctacctgttcgtcgac
atggctcacgtagcgggcctggtcgccgccggcgtctacccgaacccggtgcctttcgct
gacgtggtgaccaccaccacccacaagaccctgcgcggtccacgtggcggcctgatcctg
gctcgcgccaacgccgagatcgagaaaaagctcaactccgccgtattcccgggtgcccag
ggcggcccactggagcacgtgatcgccgccaaggccatctgcttcaaggaagccttgcag
cctgagttcaagacctaccagcaacaagtggtgaaaaacgcccaggtcatggcgtccgtc
ttcatcgagcgcgggtttgacgtggtctccggcggtactgaaaaccacctgttcctgctg
tcgctgatcaagcaggacatctccggcaaagacgcggatgccgctctgggcaaggcgttc
atcaccgtgaataagaactcggtgccgaacgacccacgttcgccgttcgtcacctcgggc
ctgcgcttcggcaccccggccgtgaccactcgcggcttcaaggaagccgagtgcaaggaa
ctggctggctggatctgtgacatcctggccgacctgaacaacgaagcggtgatcgatgcc
gtgcgtgagaaggtcaaggctatctgcaagaagctgccggtatacggcgcgtaa
DBGET
integrated database retrieval system