Pseudomonas mucidolens: NCTC8068_04561
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Entry
NCTC8068_04561 CDS
T08935
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pmud
Pseudomonas mucidolens
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmud03400
]
NCTC8068_04561
DNA repair and recombination proteins [BR:
pmud03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NCTC8068_04561
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
AAA_16
DnaB_C
AAA_22
GvpD_P-loop
RecA
SLFN-g3_helicase
AAA
nSTAND3
AAA_24
AAA_14
DUF7125
Rad51
NTPase_1
MCM
ABC_tran
AAA_29
DUF7129
Motif
Other DBs
NCBI-ProteinID:
SQH36207
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All DBs
Position
1:complement(4960473..4961840)
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AA seq
455 aa
AA seq
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MAKAKRMYGCTECGATFPKWAGQCGECGAWNTLTETMVESGGAAAPSGRSGWTGQQAQIK
TLAEVSVEEIPRFSTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCSIASRMS
ALYVTGEESQQQVAMRARRLGLPQDKLRVMTETCIESIIATARLEKPKVMVIDSIQTIFT
EQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFAMTDRGLKEVSNPSAIFLTRAQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKGNAPKESPPGLQIIAVTRLEQALDALFE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggccaagcgcatgtacggctgcacggagtgcggcgcgaccttccccaagtgg
gctggccaatgcggtgaatgcggcgcgtggaacaccctcactgaaaccatggtggaaagc
ggcggcgcagcggcacccagcggtcgttccggctggacgggccaacaggcccagatcaag
accctggccgaagtcagcgtcgaagagattccgcgtttctccaccgcatccggtgaactg
gatcgggtactcggtggcggcctggtggacggttcagtggtactgatcggtggtgatccg
ggcatcggcaaatccaccatcctgctgcaaaccctgtgcagtatcgccagccgcatgtcg
gcgctgtatgtcacgggcgaggaatcgcagcagcaagtggccatgcgcgcccgtcgactg
ggcttgccccaggacaaactgcgggtcatgaccgaaacctgcatcgaaagcatcatcgcc
accgcccgcctggaaaaacccaaggtcatggtgatcgattcgatccagacgatttttacc
gaacaactgcaatccgcgccgggcggggtttcccaggtgcgcgagagcgcagcgctgttg
gtgcgttatgcgaagcagagtggcacggcgattttcctggtgggccacgtgaccaaggag
ggcgcgctggccgggccgcgagtgttggagcatatggtcgacaccgtgctgtatttcgaa
ggggaatcggacggtcggctgcgtctgttgcgggcggtgaaaaaccgtttcggcgcagtc
aatgagctgggtgtgttcgccatgaccgaccgggggctgaaagaggtctccaacccgtcg
gcgatctttctcacacgggcgcaggaagaagtcccgggcagcgtggtgatggcgacgtgg
gaaggcactcgaccgatgctggtggaagtccaggcgctggtcgatgacagccacctggcc
aacccgcgccgcgtgaccctgggcctggatcagaaccgtctggcgatgttattggcggta
ttgcaccgccatggcggtattccgacccatgatcaggacgtgttcctcaacgtggtgggc
ggggtcaaggtactggaaaccgcctccgatctcgcgctgatggcggcggtgatgtcgagc
ctgcgcaatcggccgttgccgcacgatctgctggtgtttggcgaggtggggctgtcgggc
gaagtgcgcccggtgcccagcggccaggagcgtctcaaagaagccgccaagcacggtttc
aaacgggccatcgtgcccaagggcaatgcgccgaaagagtcgccgccggggttgcagatt
atcgcggtcacgcgtctggagcaggcgctggatgcgttgttcgagtaa
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