Pseudomonas mucidolens: NCTC8068_04848
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Entry
NCTC8068_04848 CDS
T08935
Symbol
lptD
Name
(GenBank) organic solvent tolerance protein
KO
K04744
LPS-assembly protein
Organism
pmud
Pseudomonas mucidolens
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmud02000
]
NCTC8068_04848 (lptD)
Transporters [BR:
pmud02000
]
Other transporters
Pores ion channels [TC:
1
]
NCTC8068_04848 (lptD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD
LptD_2
LptD_N
OstA_2
DUF6843
Motif
Other DBs
NCBI-ProteinID:
SQH36711
LinkDB
All DBs
Position
1:5238508..5241306
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AA seq
932 aa
AA seq
DB search
MALKSPAFRRKFPLLVTGSLLAMQPFATSFVVAAEQYDCSVSASGAWDCAPKTSAAPLPP
RPVHDGSAVSSANSTPQGEAASAEAEPKTLLVTESKGRGLRSRSADYSHLDWVPREKLTA
AQLAETGPYCAGAYIEPIRPGMNDKTDKSDAPTFIGAKASRYEQEQQIASLAGDVVMRQG
SMQIEADEANLYQAENRGELNGKVRLRDNGALIVGDRAEVQLDTGAAQIDNAEYVMHKSR
IRGNALYAKRAENAIIRLKDGTYTTCEPDSNAWQLRGNNITLNPATGFGTATNATLRVKN
IPILYTPYIYFPIDDRRQSGFLPPSFSTGSETGFTLTTPYYFNLAPNYDATLYPQYMTKR
GLLMEGEFRYLTKSSEGQFGGAYLNDDNDERKKQTDYEKTRYMVNWQHKGGLDSRVLTEV
DYTDISDPFYFQDLKSNQIGIETQDVVNQQGAVSYRGDGYTARLNLQAYELATISQITPY
NRLPQLTFNGALPYHPGGLNFAYETEAVRFDRNLRTGNVTNEDGGPFNDDGTVGELRLDE
NVRGLKRANGTRLNFAPSISLPMNASYGYITPKLKYVYTKYDLDLDNKGKDALVAAGDEF
KSSPDRSVPIASIDSGLYFDRSTQWFGKNYSQTLEPRLFYLYVPEKDQTDIPVFDTSEST
FSYASLFRDNRFSGGDRIGDENKLSFGLTSRWIEENGFERQRVAIGQAVYFKDREVQLPG
VLAADRADSQSNVSPIALDYEFRFNRDWRATADYNWDTDSHSPRSGSAMFHYQPEDNPNK
IVNIGYRYRNDQVVYNQLTGEWQFGGDYGRPGQANYVEDYYKIQQHDFSMMWPIIPQWNL
ITRWQYDYARNRTLEAFGGFEYDNCCWKLRVINRYWVSNDEYTQLAPLNEKGDHGLFFQI
VLKGLGGLTGAKVESFLDKGIQGYRKREDQAF
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcattgaaatcccccgcgtttcgtagaaaatttccgttgctggtaaccggcagtctg
ctggccatgcaacccttcgccacctcattcgtggtcgccgcggaacagtatgactgctca
gtctctgcttcgggtgcctgggattgtgcaccgaaaaccagcgccgccccactaccaccg
cgcccggtgcatgacggcagcgccgtcagctcggccaacagcacgccgcaaggcgaggct
gccagtgccgaggccgaacccaagaccctgctggtcactgaatccaagggccgtggcctg
cgttcgcgcagcgccgactacagccacctggactgggttccgcgcgagaaactcaccgct
gcgcaactggccgaaaccggtccttattgcgccggtgcgtacatcgagccgatccgcccc
ggcatgaacgacaagacggacaagagcgacgccccaaccttcatcggtgccaaggcgtcc
cgttacgagcaggagcagcagatcgcttccctcgccggcgacgtggtcatgcgtcaaggc
agcatgcagattgaggccgacgaggccaacctgtaccaggccgagaaccgtggcgagctg
aacggcaaagtccgtctgcgcgacaacggtgcgctgatcgtcggcgatcgcgccgaggtc
caactggacaccggtgcggcgcagatcgacaacgccgaatacgtcatgcacaaatcgcgc
atccgcggaaacgcgctgtacgccaagcgtgccgaaaacgcgatcatccgtctcaaggac
ggtacgtacaccacctgcgagccagacagcaatgcctggcagctgcggggcaacaacatc
acgttgaacccggcgaccggtttcggtaccgccaccaacgcgacgttgcgggtcaagaac
attccgatcctgtacaccccgtatatctatttcccgatcgacgaccgtcgtcagtccggc
ttcctgccgccaagcttcagtaccggcagcgaaaccgggtttaccttgacgaccccgtac
tacttcaacctggcgccaaactacgacgccacgttgtacccgcaatacatgaccaagcgc
ggcctgttgatggaaggcgaattccgctacctcaccaagtccagcgaaggtcagttcggc
ggcgcgtatctgaatgacgacaacgacgagcgcaaaaaacagaccgattacgaaaaaact
cggtacatggtgaactggcagcacaagggtggtttggattcgcgggtattgactgaagtc
gattacaccgacatcagcgacccattctattttcaggatctgaagtccaatcagattggc
attgaaactcaggacgtcgtcaaccagcaaggtgctgtcagttatcgcggtgatggctac
acggctcgcctgaatctgcaagcttacgagctggcaacgatttcccagataaccccgtat
aatcggctgcctcaactcaccttcaacggtgcactgccttatcatccgggtggactgaat
tttgcctatgaaaccgaagcggtccgatttgatcggaacctcaggaccggcaatgtaacc
aacgaagatggtgggccgttcaacgatgacggcactgtaggcgaacttcgcctggatgaa
aacgttcgaggcttgaaacgcgccaacggtactcgactgaacttcgcgccaagcatttcg
ctgccgatgaatgcgtcctacggctatatcacgccgaagctcaagtacgtctatacgaag
tacgacctcgacctggataacaaaggcaaggatgctcttgttgcagctggcgacgagttc
aaaagttccccggatcgctccgttccgattgccagtatcgacagcggtctttacttcgat
cgctccactcaatggttcggcaagaactacagtcagaccctggaaccgcgtctgttctat
ctttatgtacccgagaaagatcagaccgacattccggtgttcgacaccagtgaatcgacc
ttcagctacgcctcgctgttccgtgacaaccgcttctcgggcggcgatcggatcggcgac
gagaacaagctgtcgtttggcctgaccagtcgctggattgaagagaacggctttgaacgt
cagcgcgtagctatcggccaggccgtgtatttcaaggatcgtgaagtccagctgccaggc
gtccttgccgccgaccgcgccgactcccaatcgaatgtctcgccaatcgccctggactac
gagttccgcttcaaccgcgactggcgcgccactgccgactacaactgggacaccgacagc
cacagcccgcgttcgggcagtgcaatgttccactaccagccggaagacaacccgaacaag
atcgtcaacatcggttatcgctatcgcaacgaccaggtggtctacaaccagctgacgggt
gaatggcagtttggcggtgactacggacgtcccggccaagcgaactacgtggaggattac
tacaaaatccagcaacacgacttctcgatgatgtggccgatcattccgcagtggaacctg
atcacccgctggcagtacgactacgcccgcaaccgcacgctggaagccttcggtggtttc
gagtatgacaactgctgctggaaactgcgtgtgatcaaccgttattgggtttccaacgac
gaatacacccagctcgccccgctgaacgaaaaaggcgaccatgggctcttcttccaaatt
gtcctgaagggacttggtggcctgaccggcgccaaggtagagagcttcctcgacaaaggc
atccaaggttatcgtaaacgtgaagatcaagctttctga
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