Pseudomonas mucidolens: NCTC8068_04926
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Entry
NCTC8068_04926 CDS
T08935
Symbol
polC_3
Name
(GenBank) putative DNA poymerase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud03030
DNA replication
pmud03430
Mismatch repair
pmud03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC8068_04926 (polC_3)
03430 Mismatch repair
NCTC8068_04926 (polC_3)
03440 Homologous recombination
NCTC8068_04926 (polC_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmud03032
]
NCTC8068_04926 (polC_3)
03400 DNA repair and recombination proteins [BR:
pmud03400
]
NCTC8068_04926 (polC_3)
Enzymes [BR:
pmud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC8068_04926 (polC_3)
DNA replication proteins [BR:
pmud03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC8068_04926 (polC_3)
DNA repair and recombination proteins [BR:
pmud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC8068_04926 (polC_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
SQH36859
LinkDB
All DBs
Position
1:5320143..5320850
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AA seq
235 aa
AA seq
DB search
MSWFSWLRPSRPALSATQQARLEQLPGARPLGDGSLRAQRWVVLDLETSGLNLNRDQVLS
IGAVVIEDAAIDFSQQFERTLQRADAKPGPSVLIHGLGPSAIAAGCDPVEALLDFMTFVG
DSPLLAFHAPFDQHMLGRALKDSLGYHLAHPFLDVADLAPLLCPQASIRETGLDNWIDHF
NLQVGERHHASADALATAELALILFSRARQQHLDSPLALQQRVSQWKRRTQAPSF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
gtgagttggttcagttggctacgtccgtcacggccagctttgagcgccacacaacaggct
cgtctggaacagttgccaggcgcccggccgttgggcgacggctcgctgcgggcgcaacgc
tgggtagtgctggacctggagaccagcggcctcaacctcaatcgcgaccaggtgctgtcg
attggcgcggtggtgatcgaggacgcagccatcgacttttcccagcagttcgagcgcacc
ctgcaacgggccgatgccaagcccggccccagcgtgctgatccacggcctggggcccagc
gccattgccgcagggtgcgatccggtcgaggcgttgctggatttcatgacgtttgtcggt
gacagtccgctgctggcatttcatgcgccgttcgaccagcacatgctcggccgtgcgctc
aaggacagcctcggctatcacctggctcacccgtttctcgacgtcgccgacctggcgccg
ctgttgtgtccgcaagcctcgatccgtgagacgggcctggataactggatcgatcacttc
aacctgcaagtcggtgagcgccatcatgccagcgccgatgccctggccacggcggagctg
gccttgatcctgttcagccgagcacgtcagcaacacctcgacagccccctcgccttgcaa
cagcgcgtgagccaatggaagcggcgcacgcaggcaccctctttctag
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