Pseudomonas mucidolens: NCTC8068_05112
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Entry
NCTC8068_05112 CDS
T08935
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC8068_05112 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmud03019
]
NCTC8068_05112 (rppH)
Messenger RNA biogenesis [BR:
pmud03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NCTC8068_05112 (rppH)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
SQH37180
LinkDB
All DBs
Position
1:complement(5513736..5514215)
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AA seq
159 aa
AA seq
DB search
MIDPDGFRPNVGIILTNDAGQVLWARRINQDAWQFPQGGINPDETPEDALYRELNEEVGL
EREDVQILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLISNEQRVRMDLTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLARD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaccccgatggtttccgtcctaatgttgggattattcttacgaatgatgccgga
caggtgctatgggctcgccgtatcaaccaagatgcctggcagtttcctcaaggcgggatc
aaccccgatgaaacccctgaagacgccctgtaccgtgagttgaacgaagaagtgggcctt
gagcgcgaagatgtgcagattctcgcctgtacccgtggctggttgcgttatcgtttgccg
caacgcctggtacgtacccacagccaaccgctgtgcatcggccagaagcagaaatggttt
ctcctgcgcctgatctcgaacgagcagcgggtgcggatggatttgaccggtaaaccggag
ttcgatggctggcgctgggtcagttattggtatccgttgggccaggtggtgacattcaag
cgcgaggtttatcgtcgcgctctcaaagaacttgccccgcgcctcttagcgcgcgactga
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