Pseudomonas mucidolens: NCTC8068_05291
Help
Entry
NCTC8068_05291 CDS
T08935
Symbol
tssK1
Name
(GenBank) type VI secretion protein TssK1
KO
K11893
type VI secretion system protein ImpJ
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NCTC8068_05291 (tssK1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pmud02044
]
NCTC8068_05291 (tssK1)
Secretion system [BR:
pmud02044
]
Type VI secretion system
Imp/Vas secretion system core components
NCTC8068_05291 (tssK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
PADRE
Motif
Other DBs
NCBI-ProteinID:
SQH37416
LinkDB
All DBs
Position
1:complement(5695189..5696523)
Genome browser
AA seq
444 aa
AA seq
DB search
MSWNNRVVWSEGMFIGTQHFQQHDRYLENLIDARSRPLAAGAWGFSELLIDQGLLAQGKL
AIVSARGLLPDGTPFNIPQDDLAPSPLNIDDSLRDGLVYLALPLKRAGAPDTVDEGAALG
AARYVSQVREVRDDNAPFENRAPVAVGSRALRLLTTEDGVSDYAAIGLVRIKEKRADRAL
VLDDSYIPPVLDVAASKPLTAFRSELLGLLHQRGEALAGRVVASGAGGASEIADFMLLQL
VNRAQPLIQHLNQLSPLHPERFFSELVSLAGEFSTFSTVGRRPQEYPQYQHDDLVLSFTP
VMQALREALSMLIDSKATPIPIVEKAYGVHVAMLADKTLIDSASFILVVRADVPSETLRA
RFGQQSKVGSVEHIRDLVNLQLPGIGLLPLPVAPRQIPYHAGSTYYELDRGSEHWQQLIH
SGGFAFHIAGQFPGLNLAFWAIRG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggaacaatcgcgtggtctggtcggaaggcatgttcatcggaacgcagcacttt
cagcagcatgaccgttacctggaaaacctgattgatgcccgcagccgtccgttggcggca
ggcgcgtggggcttttccgaactgctgatcgaccaagggctgctggcccaaggcaagctg
gccatcgtctcggcccgtggcttgttgcccgatggcacgccgttcaacattccccaggac
gatctggcaccgagcccgttgaacattgacgacagcctgcgcgacggcttggtttacctg
gccttgccgctcaaacgcgccggcgcccccgatacggtcgatgaaggtgcagccctgggc
gccgcgcgttatgtgagccaggtccgggaagtgcgcgacgacaatgcgccgtttgaaaat
cgtgcgccggtggcggtcggttcgcgtgccttgcgtttgctgacgaccgaggatggcgtc
agcgattacgcagccatcggcctggtacgcatcaaggaaaagcgcgccgaccgcgcgctg
gttctggatgacagctacatcccgccagtgctcgacgtggcggccagcaaaccgctgaca
gcctttcgcagcgaactgcttggcttgctgcatcaacgcggcgaagccctcgccgggcgg
gtcgtggcgtcgggcgccggtggtgcttcggagattgccgacttcatgctgctgcaactg
gtcaaccgcgcgcagccgttgattcagcacttgaaccagttgagcccattgcatccggag
cgttttttcagcgaactggtcagcctggctggcgaattctcgaccttctccacagtcggc
cgtcgtcctcaggaatatccgcaataccagcatgacgatcttgtcctgagcttcaccccg
gtgatgcaggcattgcgtgaagcgttgtcgatgctgatcgacagcaaagccacgccgatc
ccgattgtcgagaaagcctacggcgtccatgtggcgatgctcgcggacaaaaccttgatc
gacagcgcaagtttcatcctggtggtacgcgccgatgtgccgagcgaaaccttgcgcgca
cgcttcggccagcaaagcaaagtcggttcggtggaacacattcgcgacctggtcaatctg
caattgccgggtattggcctgctgccgctgccggtggcgcctcggcagattccgtaccac
gccggttccacttactacgagttggatcggggcagcgagcattggcagcaattgatccac
tccggcggttttgccttccacatcgccgggcaattcccgggcttgaacctggccttctgg
gcgatccgaggataa
DBGET
integrated database retrieval system
