Pseudomonas mucidolens: NCTC8068_05297
Help
Entry
NCTC8068_05297 CDS
T08935
Symbol
hcp1
Name
(GenBank) hemolysin co-regulated type VI secretion system effector
KO
K11903
type VI secretion system secreted protein Hcp
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud02025
Biofilm formation - Pseudomonas aeruginosa
pmud03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NCTC8068_05297 (hcp1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NCTC8068_05297 (hcp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pmud02044
]
NCTC8068_05297 (hcp1)
Secretion system [BR:
pmud02044
]
Type VI secretion system
Imp/Vas secretion system core components
NCTC8068_05297 (hcp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_HCP
Motif
Other DBs
NCBI-ProteinID:
SQH37422
LinkDB
All DBs
Position
1:5702113..5702601
Genome browser
AA seq
162 aa
AA seq
DB search
MAVDIFIKIGDIKGESMDKAHKDEVDVLNWSWGMSQSGNMHVGGGGGAGKVNIQDLSLTK
YVDKASPNLMMHCASGKHIDKVKLTVRKAGGENQVEYMIINLEEVLITSLSTGGSGNDDR
LTENVTLNFAKVLVDYQPQKADGTKDGGPIKFGWNIRQNIKA
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgatattttcatcaagatcggtgacatcaagggcgagtccatggacaaggcc
cataaggacgaagtcgacgtattgaactggagctggggcatgtcccagtccggcaacatg
cacgtcggtggtggcggtggcgcaggcaaggtgaatatccaggacctgtcgttgaccaag
tacgtcgacaaagcctcgcccaacctgatgatgcattgcgccagcggcaagcacatcgac
aaggtcaagctgaccgtgcgcaaggccggcggcgaaaaccaggtcgagtacatgatcatc
aacctggaagaagtgctgatcacgtccctgagcactggcggctcgggcaacgatgatcgc
ctgaccgaaaacgtcaccctgaacttcgccaaggtgctggtggactaccagccgcagaaa
gccgacggcaccaaggacggcggtccgatcaagttcggctggaacatccgccagaacatc
aaggcgtaa
DBGET
integrated database retrieval system
