Pseudomonas mucidolens: NCTC8068_05303
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Entry
NCTC8068_05303 CDS
T08935
Symbol
clpV1_2
Name
(GenBank) chaperone
KO
K11907
type VI secretion system protein VasG
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud02025
Biofilm formation - Pseudomonas aeruginosa
pmud03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NCTC8068_05303 (clpV1_2)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NCTC8068_05303 (clpV1_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pmud02044
]
NCTC8068_05303 (clpV1_2)
Secretion system [BR:
pmud02044
]
Type VI secretion system
Imp/Vas secretion system core components
NCTC8068_05303 (clpV1_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
Clp_N
NBD_SMAX1
Zeta_toxin
AAA_25
Sigma54_activat
TniB
nSTAND3
AAA_7
ATPase_2
AAA_14
NACHT
Torsin
AAA_18
CbiA
Hpr_kinase_C
SRP54
Motif
Other DBs
NCBI-ProteinID:
SQH37428
LinkDB
All DBs
Position
1:5706942..5709620
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AA seq
892 aa
AA seq
DB search
MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQF
NLEPARLARDLTDALDRLPRGSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVLG
ILKTPSLRHALLGLSSEFDKIKAEALSERFDEYVGDSPENALGASDGFNAGAVPGEASGA
MAPSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAG
VGKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQAS
PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPAL
TRRFQVVHVAEPAEDKALLMMRGVASTMEKHHQVQILDEALEASVKLSHRYIPARQLPDK
SVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREHAIGIAIGARQTNSEAL
LTAERERLASLESRWAEEKTLVDELLATRATLREKAGVVDSDVGTDESHTLREKLLDLQQ
RLTALQGETPLILPTVDYQAVASVVADWTGIPVGRMARNELETVLNLDQHLKKRIIGQDH
ALQMIAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITINMS
EFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFD
KGVMEDGEGRVIDFKNTLILLTTNAGTELISQVCKDPASIPEPEAIAKALRQPLLEIFPP
ALLGRLVTIPYYPLSDEMLKAITRLQLDRIKKRVENTHKVAFDYDAAVIDLIVSRCTETE
SGGRMIDTILTNSLLPDMSREFLTRMLEGKALAGVRISTRDNELHYDFSDAA
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaatcagtcgcgccgcattgttcggcaaactcaacagcgtggcctacaaagcc
atcgaagccgccactgtgttctgcaagctgcggggcaatccgtatgtggaattggcccac
tggtttcaccagttgttacaactgcaggactcggacctgcaccgtatcatccgtcagttc
aacctggagccggcgcgcctggcccgcgacctgaccgacgccctggaccgcctgccccgt
ggctcgacgtcgatcactgacctgtcgtcccacgtcgaagaagccgtggagcgcggctgg
gtctacggcagcctgatgtttggcgaaagccaggtgcgcaccggttacctggtgctgggg
attctcaagaccccaagcctgcgccatgcgctgctgggcttgtcgtcggaattcgacaag
atcaaggccgaagccctgagcgagcgctttgacgaatacgtcggcgactcgccggaaaac
gccctcggcgccagcgatggtttcaatgccggcgccgtgcccggtgaagccagcggcgcc
atggccccaagcgctatgggcaagcaggaagccctcaagcgtttcaccgtcgacctgacc
gaacaagcccgtagcggcaagcttgacccgatcgtcgggcgtgacgaagaaatccgccaa
ctggtggacatcctcatgcgtcggcgtcagaacaacccgatcctcactggcgaagccggc
gtcggcaagaccgccgtggtcgaaggtttcgccctgcgtatcgtcgccggcgacgtgccg
cccgcgctcaaggatgtggaactgcgcagtcttgatgtgggcctgctgcaggccggcgcc
agcatgaaaggcgagttcgaacagcgtctgcgtcaggtcatcgaagacgtccaggcctcg
cccaagccgatcatcctgtttatcgatgaagcccacaccctggtgggtgccggtggcgcc
gccggcaccggcgatgcggccaacctgctgaagccggcattggcccgtggcaccttgcgc
accgtggccgccaccacctgggccgagtacaaaaaacacatcgaaaaagacccggcgctg
acccgccgcttccaggtcgtacacgtcgccgagcctgccgaagacaaagcgctgctgatg
atgcgcggcgtggcgtcgaccatggaaaaacaccaccaggtgcaaatcctcgacgaagcc
ctggaagcctcggtcaagctgtcccaccgctatattccagcacgtcagttgccggacaaa
tccgtaagtctgctggacaccgcctgtgcccgcgtcgccatcagcctgcacgcggttcca
gcggaagtggacgatagccgccgccgcatcgaagcgttggaaaccgagctgcaaatcatc
gctcgcgagcacgcgatcggcatcgccatcggcgcccgtcaaaccaacagcgaagccttg
ctgacggcagagcgtgagcgcctggcgagcctggaaagccgctgggctgaagagaaaacc
ctggtcgacgaactgctcgccacccgcgccacgctgcgggaaaaagcaggcgtggtcgac
agcgacgtcggtaccgacgagagccacaccctgcgggaaaaactgctggacctgcaacag
cgtctcaccgccttgcaaggtgaaacgccattgatcctgccgaccgtggattaccaggcc
gtggcctcggtggtcgccgactggaccggcatcccggtcggtcgcatggcgcgtaatgaa
ctggaaacggtacttaacctcgaccagcacctgaagaaacgcatcatcggccaggatcac
gccctgcagatgatcgccaagcgcatccagacctctcgcgccggcctcgacaacccgagc
aagccgattggtgtgttcatgctggccggtacctccggcgtaggcaagaccgaaaccgcc
ctggccctggccgaagccatgtacggcggcgagcagaacgttatcaccatcaacatgagc
gagttccaggaagcccatacggtgtcgaccctcaagggcgcaccgccgggttatatcggg
tatggcgaaggcggcgtgctgactgaagcggtacggcgcaaaccctacagcgtggtgctg
ctggacgaggtggaaaaggcccacccggatgtgcatgaaatcttcttccaggtcttcgac
aaaggtgtgatggaagacggcgaaggccgggtgatcgacttcaagaacaccttgatcctg
ctgaccaccaacgccggtaccgaactgatttcccaggtctgcaaagacccggcgagcatc
ccggaacctgaggccattgccaaggccctgcgccaaccactgctggagattttcccgcca
gcgctgctcggacgcctggtgacgattccttactacccgctgagcgacgagatgctcaag
gcaatcacccgcctgcaactcgatcgcatcaagaagcgcgtggagaacacccacaaagtc
gcgttcgattacgacgccgcggtgatcgacctgattgtctcgcgctgcaccgaaaccgaa
agtggcggccgcatgatcgacaccatcctgaccaacagcctgttgccggacatgagccgc
gagttcctcacgcgcatgctggaaggcaaggccttggcgggagtgcggatcagcacgcgg
gataacgaattacactacgacttcagcgacgcggcatag
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