Pseudomonas mucidolens: NCTC8068_05380
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Entry
NCTC8068_05380 CDS
T08935
Symbol
ybbH_2
Name
(GenBank) RpiR family transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pmud
Pseudomonas mucidolens
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmud03000
]
NCTC8068_05380 (ybbH_2)
Transcription factors [BR:
pmud03000
]
Prokaryotic type
Helix-turn-helix
Other families
NCTC8068_05380 (ybbH_2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
Motif
Other DBs
NCBI-ProteinID:
SQH37571
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All DBs
Position
1:complement(5788797..5789663)
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AA seq
288 aa
AA seq
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MNLLQHIAQSRHLLRKSELKVADHVLLDPAAVMHSSMADLAHSVGISEPTIVRFCRAIGC
SGFQDLKLKLAQSLAAGASFGQFAIHEDDSVADYSLKIFDTTLHTLMEVREKLDPVELQK
AVTAMSQAQRVEFYGFGASGAVAADAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAI
CISQSGRSKDLLITANLVRESGASLITLCPSQTPLAELSTVNLAIDVHEDTEIYTPLTSR
IAHLVVIDVLAMGVAMARGPSLVNHLKSVKRSLRSLRLSPKSVKALDD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
ttgaacctgttgcaacatatcgcccagtcgcgccacctgttacgcaaatcggaactcaag
gttgccgatcacgtgctgcttgatcctgcggccgtgatgcacagttccatggctgacctg
gcccacagcgtgggtatcagcgagccgaccatcgtgcgtttctgtcgcgccatcggttgc
tcggggtttcaggatctgaagctgaaactggcccagagcctggcggccggcgcgagcttc
gggcagtttgcgattcacgaagacgattccgtcgccgattacagcctgaaaattttcgac
accaccctgcacaccctgatggaagtgcgggaaaagctcgacccggtggaattgcaaaaa
gccgtgaccgccatgtcccaggcccagcgcgtggagttttatggcttcggtgcgtccggc
gcggtcgcggccgacgcccagcacaagttcttccgcctgctgctgacggcggcggcctac
agtgacccgcacatgcaggcgatgtcggcggtgacgttgaagccgactgacgtggcgatc
tgcatttctcagtccggtcgctccaaggatttgctgatcaccgccaacctggtgcgtgaa
agtggcgcctcgctgattaccctgtgcccaagccagacgccgttggcggagctgtcgacc
gtcaacctggcgatcgatgtccacgaagacaccgaaatctacaccccgctgacctcgcgt
atcgcccatctggtggtgattgacgtgctggcgatgggcgtggcaatggcgcgcggcccc
agcctggtcaaccacctcaagagcgtcaagcgcagcctgcgcagcctccgtctgtcaccc
aagtccgtcaaggccctcgacgactaa
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