Prevotella multiformis: J4864_01865
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Entry
J4864_01865 CDS
T07481
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pmuf
Prevotella multiformis
Brite
KEGG Orthology (KO) [BR:
pmuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmuf03009
]
J4864_01865 (rlmD)
Enzymes [BR:
pmuf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
J4864_01865 (rlmD)
Ribosome biogenesis [BR:
pmuf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
J4864_01865 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_25
PCMT
N6_N4_Mtase
MTS
PrmA
Motif
Other DBs
NCBI-ProteinID:
QUB70998
LinkDB
All DBs
Position
1:complement(485697..487121)
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AA seq
474 aa
AA seq
DB search
MSRKRKPFPLLENITIEAVAAEGKCVAHVDDKVVFVPFVVPGDVVDLQIRKKKRTYCEAT
VVRFVSKSAVRETPMCEHFGICGGCKWQNLPYNEQLKAKQQQVYDQLSRIGKVELPEFRP
IMGSVHTKEYRNKLEFGCANKRWYTAEELQALPEDAGLSEGAIGFHITGAFDKVYPIEKC
WLMDDLCNQIRNDIRDYALGTGMTFYDIRGQHGLLRDIMVRNSNTGEWMVLIQFHYDEEG
DEERAKALMQHVADRFPQITSLSYVDNQKGNDTFNDLDLITFKGNDYIFETMEDLKFKVG
PKSFYQTNTEQAYHLYSVAREFASLTGDELVYDLYTGTGTIANFVAGKARKVIGIEYVPE
AIEDAKVNSEINNISNTLFYAGDMKDILTEDFISRQGRPDVIITDPPRAGMHPEVINVIL
GASPERIVYVSCNPATQARDLALLDADYQVAAVQPVDMFPHTPHVENVVLLEKR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaaagagaaagccattcccccttctggagaacatcaccatagaagcggtggca
gccgaaggaaaatgtgtcgcccacgtagacgacaaggtcgttttcgtcccattcgtcgtt
ccgggagacgtcgtagacctccagatacgcaagaagaaacgcacttactgcgaagctacg
gttgtccggttcgtcagcaagagtgctgtacgcgagacccccatgtgcgaacacttcggc
atctgcggcgggtgcaaatggcagaatctgccttacaacgaacagctgaaagcaaagcag
cagcaggtctatgaccagctgagccgtatagggaaggtggagcttccggagttccgtcct
atcatgggatccgtgcatacaaaggaatatcgcaacaagctggagttcgggtgcgccaac
aaacgatggtacacggcagaggaattgcaggctctgccggaggatgccggactgtcagag
ggagccatcggcttccacatcacaggagctttcgacaaggtctaccccattgagaaatgc
tggctgatggatgatctctgcaatcagatccgcaatgacatccgcgactatgcgctcgga
acaggcatgacattctacgacatccggggacagcatggcctgctgcgtgacattatggtg
cgcaactccaatacaggcgagtggatggtactcatccaattccactacgacgaggaggga
gacgaggagcgtgcgaaggcgctgatgcagcatgtcgccgaccgttttccgcagatcacc
tccctctcctatgtagacaaccagaaggggaatgacactttcaacgacctcgacctcatt
accttcaaaggcaacgactacatcttcgagacaatggaagacctgaaattcaaggtaggt
ccgaagagcttttaccagacaaataccgaacaggcctaccatctctattccgtagccagg
gagttcgcctcccttacaggcgacgaactcgtttacgacctctacaccggaacagggaca
atcgccaacttcgtcgccggtaaggcacggaaagtcatcggtatagagtatgtaccggaa
gccattgaagacgccaaggtcaattctgagatcaacaacatcagcaacacgcttttctat
gcaggagacatgaaagatattctgacagaggatttcatcagccgtcagggtcgtcctgat
gtcattatcaccgaccccccacgtgccggcatgcatcctgaagtcatcaatgtcatcctc
ggagcaagtccggaacgtatcgtttacgtcagctgcaacccagccacccaggcacgcgac
ctcgccctgctcgatgcagactatcaggttgcggccgtccagccggttgatatgtttccg
catacgccgcacgtggagaacgttgtccttttagagaagcggtga
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