Prevotella multiformis: J4864_03115
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Entry
J4864_03115 CDS
T07481
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pmuf
Prevotella multiformis
Pathway
pmuf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmuf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J4864_03115 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmuf03400
]
J4864_03115 (xth)
Enzymes [BR:
pmuf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
J4864_03115 (xth)
DNA repair and recombination proteins [BR:
pmuf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
J4864_03115 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QUB71222
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All DBs
Position
1:775127..775876
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AA seq
249 aa
AA seq
DB search
MKLISWNVNGLRACVGKDFEQQFKALDADFFCLQETKMQAGQLDISFPGYTSYWNYADKK
GYSGTAIFTKHKPLDVTYGIGMDEHDHEGRVITLEMDDFYLVTVYTPNSQDGLRRLDYRM
KWEKDFQDYLHRLDEKKPVVVCGDMNVAHEEIDIKNPKTNRRNAGFTDEEREKMTRLLDS
GFIDTFRSLYPEQVTYSWWSYRFRARERNTGWRIDYFLISERLRDRLEDAKIHTEIMGSD
HCPVEVDLK
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgatttcatggaatgtaaacgggctgcgtgcctgtgtgggtaaggacttcgag
cagcagttcaaggcgctggatgccgacttcttctgcctgcaggagaccaagatgcaggcc
ggacagctcgacatcagcttccccggatatacgtcatactggaactacgctgacaagaaa
ggctattccggcacggccatcttcacgaagcacaagccgctggacgtgacctatggcatc
ggcatggacgagcacgaccatgagggacgtgtgatcacgctggagatggacgacttctat
ctcgtaacggtctacacaccgaactcgcaggacggtcttcgcagactggactacagaatg
aaatgggagaaagatttccaggattatctccacaggctcgatgagaagaaacccgtcgtg
gtgtgcggcgacatgaacgtggcccatgaggagatcgacatcaagaacccgaagacgaac
cgcaggaacgccggtttcaccgatgaggaacgtgaaaagatgacccgactgctggacagc
ggattcatcgacaccttccgttcgctctatccggagcaggtaacctactcctggtggtcg
taccgttttcgtgcgagagagcggaacacaggctggcgtattgactatttcctcatttcc
gaacgtctgcgagaccgtctcgaagatgccaagatccacacggaaatcatgggaagcgac
cactgtccggtagaagtcgacctgaagtag
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