Prevotella multiformis: J4864_03850
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Entry
J4864_03850 CDS
T07481
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pmuf
Prevotella multiformis
Pathway
pmuf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmuf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J4864_03850 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmuf03021
]
J4864_03850 (rpoC)
03400 DNA repair and recombination proteins [BR:
pmuf03400
]
J4864_03850 (rpoC)
Enzymes [BR:
pmuf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J4864_03850 (rpoC)
Transcription machinery [BR:
pmuf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
J4864_03850 (rpoC)
DNA repair and recombination proteins [BR:
pmuf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
J4864_03850 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QUB70203
LinkDB
All DBs
Position
1:complement(926116..930486)
Genome browser
AA seq
1456 aa
AA seq
DB search
MAFKKDNKVKSNFSKITIGLASPEEILENSYGEVTKPETINYRTYKPERDGLFCERIFGP
TKDYECACGKYKRIRYKGIVCDRCGVEVTEKKVRRERAGHIELVVPVAHIWYFRSLPNKI
GYLLGMPTKKLDAVIYYEKYVVIQPGVVEGMKNAETEEDLNGSHKFDLLSEDEYLDILDN
KLPEGNERLDDSDPSKFIAKMGAEAVYDLLSGIDLDRLAGELRDRATTDSSQQRKTEALK
RLQVVEGFRQSIGVNRPEWMIMKIIPVTPPELRPLVPLDGGRFATSDLNDLYRRVIIRNN
RLKRLMEIKAPEVILRNEKRMLQEAVDSLFDNSRKSSAVKSESNRPLKSLSDSLKGKQGR
FRQNLLGKRVDYSARSVIVVGPELKMGECGLPKLMAAELYKPFIIRKLIERGIVKTVKSA
KKIVDRREPVIWDILENVMKGHPVMLNRAPTLHRLGIQAFQPKLIEGKAIQLHPLACTAF
NADFDGDQMAVHLPLSNEAVLEAQILMLQSHNILNPANGAPITVPSQDMVLGLYYITKLR
PGAKGEGLSFYGSEEAIIAYNEKRCDLHAQVKVIVDDIVDGKIQKRMVETSVGRVIVNQI
IPTEIGFFNGIISKKSLRGLIADVIKAVGMARACEFLDGIKNLGYRMAYVAGLSFNLDDI
IVPEEKKDIVGKGQDEVDQVKANYEMGFITDKERYNQVIDAWTHVNNNLKASVMKHMTEA
DQGFNAVYMMLDSGARGSADQIAQLAGMRGLMAKPQKAGAEGAQIIENPIISNFKEGMSV
LEYFIASHGARKGLADTAMKTADAGYLTRRLVDVSHDVIINEEDCGSLRGLECRALKNGD
ETIATLYERILGRVSVHDVINPTTGDIIVAAGEEITEAKAQAIEDSPIEMVEIRSVLTCE
SKKGVCKKCYGRNLATARMVQMGEAVGVIAAQAIGEPGTQLTLRTFHAGGVAGNAAANAT
ITAKNEAKIEFEELRTVPFVDDEDKECQMVVSRLAEIHFIDPNTGIVLLSDNVPYGSSLY
FKSGDTVRKGDVICKWDPFNAVIVSEYAGVLRLHDVVEGVTYKAETDEATGLTERIITDS
RDKTKVPTVDVVRKGAKKGADGLYAPSDILGTYNLPVGGHLEQVLQDGAEIKTGMTLVKI
PRSVGGAGDITGGLPRVTELFEARNPSNPAVVSEIDGEITMGKVKRGNREIIVTSKTGEQ
RKYLVSLSKQILVQEHDAVRAGTPLSDGIITPADILSIMGPTAVQEYIVNEVQDVYRLQG
VKINDKHFEIIVRQMMRKVRIDDPGDTTFLEQELVDKLDFAEENDRIWGKKVVTDPGDSE
NCYKGQILSVRKLRDENSSLKRRDLKVVQVRDAVQATATQILQGITRAALGTKSFMSAAS
FQETTKVLNEAALRGKTDYLEGMKENVICGHLIPAGTGLRQWQKLVVGSQEEHERMEANK
KNVLDYANQEAETVQE
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atggcttttaagaaagataataaagtaaagagtaatttcagcaagattactatcggactg
gcttcgcctgaagagatcctcgagaactcctatggtgaggtaaccaagccagagaccatc
aactatcgtacctataaaccagagcgtgacggtctgttctgcgaacgcatcttcggccct
accaaggactatgagtgtgcttgcggtaaatacaaacgcatccgttacaaggggatagtc
tgcgatcgttgcggcgttgaggtgacagagaagaaggtacgccgtgagcgtgccggacat
attgaactggttgtcccggttgctcatatctggtatttccgtagtcttcccaacaagatc
ggttaccttctcggcatgccgaccaagaaactcgatgctgtcatatactacgagaaatat
gtcgtcatccagccgggtgtcgttgaaggcatgaagaatgccgagacggaggaggatctg
aacggttctcataagttcgaccttctttcggaagacgaatacctcgacattctcgacaac
aaactccctgaagggaatgaacggctggacgactctgatcccagcaagttcattgccaag
atgggtgcggaggctgtttatgatctcctttccggaattgacctcgaccgccttgccggc
gaattgcgcgaccgtgcgacgaccgactccagccagcagcgcaagacggaggcgttgaaa
cgcctgcaggtcgttgaaggcttccgtcagtcgatcggcgtgaacagaccggagtggatg
atcatgaagattatcccggtcactccgccggaactccgtccattggtacctctggatggt
ggccgtttcgcaacctctgacctcaacgacctctatcggcgagtgattatccgcaacaac
cgtctgaagcggctcatggagatcaaagccccggaggttatcctccgcaacgagaagcgt
atgcttcaggaagcggtcgattccctcttcgacaacagccgcaagtcgtcggctgtgaag
agcgagagcaatcgtcccctgaagtctctctctgactccctgaagggcaagcagggacgt
ttccgtcagaacctcctcggcaagcgtgtcgactactctgcccgttccgtaatcgttgtc
gggccggagctgaagatgggcgagtgcggcctgccgaagctgatggcggccgagctttac
aagccgttcatcatccgcaagctcatcgagcgcggtatcgtgaagaccgtcaagagcgcc
aagaagatcgtggatcgtcgtgagccagtcatctgggacatcctcgagaatgtgatgaaa
ggtcatccggtcatgctgaaccgcgccccgactcttcaccgtcttggtattcaggctttc
cagccgaagctcatcgagggcaaggccatccagctgcatccgctggcatgtacggcgttc
aacgccgacttcgacggtgaccagatggccgtccatctccccttgagcaatgaggctgtt
ttggaggcgcagattctgatgctccagagccacaatatcctcaatccggccaacggtgcg
ccgattaccgtcccttcgcaggacatggtgctcggcctctattatatcaccaagctccgt
ccgggagccaagggcgaaggtctctctttctacggctccgaggaagccatcatcgcttac
aatgagaagcggtgcgacctccatgcacaggtaaaggtcatcgtcgatgatatcgtcgac
gggaaaatacagaaacggatggtggagacttccgtcggccgtgtcattgtcaaccagatt
atcccgactgagatcggcttcttcaatggcatcatctccaagaaatcactccgtggcctt
atcgccgacgttatcaaggctgtcggtatggcgcgtgcctgtgagttcctggatgggatc
aagaacctcggttatcgcatggcttatgtggcaggtctctctttcaaccttgacgatatt
atcgtaccggaggagaagaaagacattgtcgggaaaggtcaggacgaggtcgaccaggtg
aaagccaactacgagatgggtttcatcaccgataaggagcgttacaatcaggtgattgat
gcctggacacatgtgaacaacaacctgaaggcaagtgtgatgaagcacatgaccgaggcc
gatcaggggttcaatgccgtttacatgatgctcgactccggtgcccgtggttccgctgac
cagatcgcacagcttgccggtatgcgtggtctgatggcgaaaccgcagaaagccggcgcc
gaaggagcgcagattattgagaacccgattatctccaactttaaggaaggaatgtccgtg
ctggagtacttcatcgcctcccacggtgctcgcaaaggtctggctgatacggccatgaag
actgccgatgccggttatctgacccgccgtcttgttgatgtctcccatgatgtcatcatc
aatgaagaggactgtggttctctccgcggtcttgaatgtcgtgcgttgaagaacggtgac
gagacgattgctacactctatgagcgcattctggggcgtgtgtctgtacacgatgtcatc
aacccgacaacaggtgacattatcgttgctgccggtgaggaaatcaccgaagccaaggcg
caggccatagaggattcgccgatagagatggtcgagatccgttccgtacttacttgtgag
agcaagaagggtgtatgtaagaagtgttacggccgcaaccttgccactgcccgcatggta
cagatgggtgaggcggtcggtgtcatcgcagcacaggccatcggcgaaccgggaacacag
cttactctccgtacgttccacgctggtggtgtggcaggtaacgctgctgccaatgcgacg
attacagcaaagaacgaggcgaagatcgagtttgaggaactccgtaccgtacctttcgtt
gacgacgaggacaaggagtgtcagatggttgtcagccgtctggcggagattcatttcatc
gatccgaacacaggcattgtcctcctttccgataatgtgccttatggtagttctctctac
ttcaagtctggcgataccgtcaggaaaggggatgtcatctgtaagtgggacccgttcaat
gccgttattgtcagtgagtatgccggtgtcctccgtctgcacgatgttgtggaaggtgtg
acttataaggctgaaaccgacgaggcgacgggtcttaccgagcgtatcatcacggactcg
cgcgacaagacaaaggtcccgacggttgacgttgtcaggaaaggtgcaaagaaaggggcc
gacggtctctatgctccttccgatattcttggtacttacaacctcccggtaggtggtcac
ctggagcaggttcttcaggatggagctgaaatcaagaccggtatgacactggtcaagatt
ccgcgttctgtgggcggtgcaggtgacattacaggtggtctgccacgtgtcaccgagctg
tttgaggcccgtaatccgtctaaccctgccgtcgtatctgaaatcgacggtgagattact
atgggcaaggtaaagcgtggcaaccgcgagatcatcgtgacttccaagaccggcgagcag
cgcaagtacctcgtaagtctgtccaagcagattcttgttcaggagcatgatgcggtccgt
gcgggcacgccgctgtccgacggtatcattacgccggccgacattctgtccatcatggga
ccgacggccgttcaggagtatatcgtcaatgaagtacaggacgtatatcgtcttcagggt
gtgaagatcaacgacaagcactttgagattatcgtccgtcagatgatgcgcaaggtgcgt
attgacgatccgggcgacaccacgttcctcgagcaggaactggtcgacaagctcgacttc
gccgaggagaacgaccgtatctggggcaagaaggttgtcaccgatccgggcgattccgag
aactgctacaaggggcagatcctctctgtccgcaagctgcgtgatgagaactcgagtctc
aagcgtcgtgacctcaaggttgttcaggtacgcgatgccgtccaggctacggctacccag
atcctccagggtatcacgcgggctgccctcggcacgaagagcttcatgagtgctgcctcc
ttccaggagacgaccaaggtgctcaacgaggctgcgctccgtggcaagaccgattatctt
gagggtatgaaggagaacgtcatctgcggtcacctcatccctgccggtacgggtcttcgc
cagtggcagaaactggttgtcggttcacaggaggagcacgaacgtatggaggccaacaag
aagaatgttcttgactatgccaatcaggaagcagagacagtacaggagtaa
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