Pseudomonas multiresinivorans: G4G71_00010
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Entry
G4G71_00010 CDS
T07281
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
pmui
Pseudomonas multiresinivorans
Pathway
pmui02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pmui00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
G4G71_00010 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmui03021
]
G4G71_00010 (rpoD)
Transcription machinery [BR:
pmui03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G4G71_00010 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GBP_C
Motif
Other DBs
NCBI-ProteinID:
QJP06330
UniProt:
A0A7Z3GMW0
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Position
2298..4151
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AA seq
617 aa
AA seq
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MSGKAQQQSRLKELITRGREQGYLTYAEVNDHLPEDISDPEQVEDIIRMINDMGINVFET
APDADALLLAETDTDEAAAEEAAAALAAVESDVGRTTDPVRMYMREMGTVELLTREGEIE
IAKRIEEGIREVMSAIAQFPGAVDGILEEYNRIVTEGGRLSDVLSGYIDPDDGTLPAEEV
EPVGLKDDAEAKDKDKDEEDEESDGDSEEEEGDGGPDPEEAARRFGAVSEQLEKAKKALK
KHGRGSKQATEELVALAELFMPIKLVPKQFDVLVAKVRDALDSVRRQERAIMQLCVRDAR
MPRADFLRQFPGHETDTAWVDSVLKGKPKYAEAIERLRDDILRNQQKLVDLETSSQLTVA
EIKDVNRSMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAV
DKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGR
EPTPEELGERMDMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDSTMQSPIEVAT
SESLKEATREVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALR
KLRHPSRSEHLRSFLDE
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaaaagcgcaacagcaatctcgtctcaaagagttgatcacccgtggtcgtgag
cagggttacctgacttacgcggaggtcaacgaccacctgccggaggatatctctgatccg
gaacaggtagaagacatcatccgcatgatcaacgacatggggatcaacgtattcgagaca
gccccggatgcggatgccctgttgctggcggaaaccgataccgatgaagctgccgccgaa
gaagctgctgccgcccttgccgcggtagagagcgacgttggccgtacgaccgacccggtg
cgcatgtacatgcgtgaaatgggtaccgtggagctgctgacccgcgaaggcgagatcgaa
atcgccaaacgcatcgaggaaggcatccgcgaggtcatgagcgccatcgcccagttcccg
ggcgcggtggacggcattctcgaagagtacaaccgcatcgttaccgaaggcggccgccta
tcggacgttctcagcggctacatcgacccggatgacggcaccctgccggccgaggaagtc
gagccggtcggcctgaaggacgacgccgaagccaaggataaggacaaggacgaagaggac
gaagagtccgacggcgatagcgaggaagaagaaggcgatggcggtccggatccggaagaa
gccgcccgtcgcttcggcgccgtctccgagcagctggaaaaggccaagaaggccctgaag
aagcacggtcgcggcagtaagcaggcaaccgaagaactggtcgccctggccgagctgttc
atgccgatcaagctggtgcccaagcagttcgacgtgctggttgccaaggtccgcgatgcg
ctggatagcgtgcgccgccaggaacgcgccatcatgcagctgtgcgtgcgtgatgctcgc
atgccgcgtgccgacttcctgcgccagttccccggccacgaaaccgacaccgcctgggtc
gactccgtactcaagggcaagcccaagtacgccgaggccatcgagcgcctgcgtgacgac
atcctgcgcaaccagcagaagttggtcgacctggaaaccagctcgcagctgaccgttgcc
gagatcaaggacgtcaaccgttccatgtccatcggcgaggcgaaagcccgtcgtgcgaag
aaggagatggtcgaggcgaacctgcgtcttgtgatctccatcgccaagaagtacaccaac
cgcggcttgcagttcctcgacctgatccaggaaggcaacatcggcctgatgaaggcggtg
gataagttcgaataccgtcgcggctacaagttctcgacctatgccacctggtggatccgc
caggcgatcacccgttcgatcgccgaccaggcccgcaccatccgtattccggtgcacatg
atcgagacgatcaacaagctcaaccgtatctcccgccagatgttgcaggagatgggccgt
gaaccgaccccggaagagctgggcgaacgcatggacatgccggaagacaaaatccgcaag
gtcctgaagatcgccaaggaaccgatctccatggaaacgccgatcggtgacgacgaagac
tcgcacctgggcgacttcatcgaggactccaccatgcagtctccgatcgaagtggcgacc
agcgagagcctcaaggaagccacccgcgaagtcctcgccggcctcaccgctcgcgaagcc
aaggtcctgcgcatgcgcttcggcatcgacatgaataccgaccacaccctcgaggaagtc
ggcaagcagttcgatgtgacccgcgaacgtatccgccagatcgaagccaaggcgttgcgc
aagctgcgccacccgtcgcgaagcgagcacctgcgctccttcctcgacgagtga
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