Pseudomonas multiresinivorans: G4G71_09110
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Entry
G4G71_09110 CDS
T07281
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pmui
Pseudomonas multiresinivorans
Pathway
pmui03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmui00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G4G71_09110 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmui03019
]
G4G71_09110 (rhlB)
Enzymes [BR:
pmui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G4G71_09110 (rhlB)
Messenger RNA biogenesis [BR:
pmui03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G4G71_09110 (rhlB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QJP08027
UniProt:
A0A7Z3BJQ2
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All DBs
Position
complement(1987594..1989153)
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AA seq
519 aa
AA seq
DB search
MLKALKKIFSKGDGEQPVATPAAPAPAAEKPAQSGERRPRKPRTPRPEGESAEKPARGPK
SDKPRAERSDKGERGEKRDQAAKAEPAKTEGADKPREPRADKPRRERKPRPPVVDNWKLE
DFAVEPAEGKTRFHDFNLDPRLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTG
KTAAFLISIITQLLQTPPPKERYMGEPRALIIAPTRELVVQIANDAIGLAKYTGLNVMSF
VGGMDFDKQLRTLESRFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIP
QVRQIIRQTPYKGERQTLLFSATFTDDVMNLAKQWTVDPAIVEIEPENVASDTVEQHVYA
VAGSDKYKLLYNLIAQNDWTRVMVFANRKDEVRRIEERLTKDGISAAQMSGDVPQHKRIK
VLEGFREGKIRVLVATDVAGRGIHVDGISHVINFTLPEDPDDYVHRIGRTGRAGSTGTSI
SFAGEDDAFALPPIEELLGRKINCEMPPTELLKPVPRKH
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgcttaaagcactcaagaaaatcttcagcaagggcgacggcgagcaacccgtggccacg
ccagcggcccccgctcccgccgcagaaaagcccgcccagagcggtgaaagacgtccgcgc
aaaccgcgcaccccgcgcccggaaggcgaatccgccgagaaaccggcccgcggcccgaag
agcgacaaaccccgcgccgagcgttccgacaaaggtgaacgtggcgaaaaacgcgaccag
gcagccaaggccgagcccgcaaagaccgaaggcgccgacaagccccgcgagccccgggcc
gacaagccgcgccgcgaacgcaagccgcgcccgccggtggtcgacaactggaagctggaa
gacttcgcggtggagccggccgaaggcaagacgcgtttccacgacttcaacctcgacccg
cgtctgatgcacgccatccatgacctgggcttcccctactgcacgccgatccaggcgcag
gtgctgggcttcaccctgcgtggccaggacgcaatcggtcgcgcccagaccggcaccggc
aagaccgcggcgttcctgatctcgatcatcacccagctgctgcagaccccgccgccgaaa
gagcgctacatgggcgagccgcgtgcgctgatcatcgcgccgacccgcgagctggtggtg
cagatcgccaacgatgccatcggcctggccaagtacaccggcctgaacgtgatgagcttc
gtcggcggcatggacttcgacaagcagctcaggaccctggaatcgcgcttctgcgacatc
ctggtcgccacccccggtcgcctgctggacttcaaccagcgcggcgaggtgcacctggac
atggtcgaagtgatggtgctggacgaagccgaccgcatgctcgacatgggcttcatcccg
caggtccgccagatcatccgccagaccccgtacaagggcgagcgccagaccctgctgttc
tccgccaccttcaccgacgacgtgatgaacctggccaagcagtggaccgtcgatccggca
atcgtcgagatcgagccggagaacgtcgccagcgataccgtcgagcagcacgtctatgcc
gttgccggtagcgacaagtacaagctgctgtacaacctcatcgcgcagaacgactggacc
cgcgtgatggtcttcgccaaccgcaaggatgaggtgcgccgcatcgaggaacgcctgacc
aaggacggcatcagcgccgcccagatgtccggcgacgtgccgcagcacaagcgcatcaag
gttctggaaggcttccgcgaaggcaagatccgcgtcctggtcgccaccgacgtcgccggc
cgcggcatccacgtcgacggcatcagccacgtgatcaacttcaccctccccgaagatccg
gacgactacgtgcaccgcatcggccgtaccggccgcgccggcagcaccggtacctcgatc
agcttcgccggcgaggacgatgccttcgccctgccgccgatcgaggaactgctgggccgc
aagatcaactgcgagatgccgcccaccgagctgctcaagccggttccgcgcaagcactga
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