Pseudomonas multiresinivorans: G4G71_26520
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Entry
G4G71_26520 CDS
T07281
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pmui
Pseudomonas multiresinivorans
Pathway
pmui03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
G4G71_26520 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmui03400
]
G4G71_26520 (recD)
Enzymes [BR:
pmui01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
G4G71_26520 (recD)
DNA repair and recombination proteins [BR:
pmui03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G4G71_26520 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
AAA_22
SH3_13
UvrD-helicase
AAA_28
NTPase_1
UvrD_C
T2SSE
SLFN-g3_helicase
HerA_C
AAA_16
PhoH
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QJP11270
UniProt:
A0A7Z3GTH6
LinkDB
All DBs
Position
complement(5818520..5820562)
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AA seq
680 aa
AA seq
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MKSTTEMLDLIGRWAERGWLRELDRAFATFLVERAPDAHPLLILAAALASHQLGRGHVCL
DLDATLADSRFALSLPPEGDSAKDAPELPGVLLDGFDLDAWRAVLNDPRLVGDGPGETPL
VLSGRRLYLRRYWQYEREVRAGIDQRLKQGEALRAALPAAPLRQALDALFPKKAGNVQAS
QGADWQKLACALVAGNAFGIVTGGPGTGKTTTVVKLLALLQSLALGEGGRPLRIRLAAPT
GKAAARLNESIAGAVQRLDLSALANGEAAREAIPTEVTTLHRLLGSRPDSRQFRHHAGNP
LALELLVVDEASMVDLEMMASLLAALPPRARLILLGDKDQLASVEAGAVLGELCSRAREG
HYRPATRDWLQAVAGEAIDDVLIDSAGSDLDQAVAMLRHSHRFSADSGIGQLAEAVNAGD
IPALRQVWKAQHEDLARIAVDAQETRSLRDLVIDGGRGGDLFGPVGYAHYLRVVSGSRPA
DNATQDALDAWARKVLEAHGQFQLLCALRRGPWGVEGLNTLIGELLQREGLIPSANGWFA
GRPVLVTRNDYGLGLMNGDIGIALALPQTADDGSVRWVARVAFPAGDGTDAIRWILPSRL
QAVETVFAMTVHKSQGSEFTHAALLLPDSLNPILTRELVYTGITRARKWLTLASAGRGWQ
VLEAATERRVQRASGLLGLS
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcaccactgaaatgctcgatctgatcggccgctgggccgagcgcggctggctg
cgcgagctggaccgcgccttcgcgaccttcctcgtcgagcgcgcgccggatgcccatccg
ctgctgattctcgccgccgccctggccagccaccagctcggccgcgggcacgtctgcctc
gacctggatgcgacgctggccgacagccgtttcgccctgtcgctgccgcccgaaggcgac
tccgccaaggacgcgccggagctgcccggcgtactgctggacggcttcgatctcgatgcc
tggcgcgcggtgctgaacgatccgcgcttggtcggcgacggcccgggtgaaacgccgctg
gtgttgtccgggcgccgcttgtatctgcgccgctactggcagtacgagcgggaagtccgc
gccggcatcgaccagcgcctgaagcagggcgaggcgctgcgggccgcgttgcccgccgcg
ccacttcgtcaggccctggacgctctgttcccgaagaaggccggcaatgttcaggcgagc
cagggggcggactggcagaagctcgcctgcgcactggtcgccggcaacgccttcggcatc
gtcaccggcggccccggcaccggcaagacgaccaccgtggtgaagctgctcgccctgctg
caaagcctggcactgggggagggcggccgcccgctgcgcatccgccttgccgcgcccacc
ggcaaggccgctgcgcgcctgaacgaatccatcgctggcgccgtgcagcgccttgacctc
tccgccctggccaatggcgaagcggcgcgggaggcgatccccaccgaagtcaccacgctg
caccgcctgctaggaagccgcccggacagccgccagttccgccaccacgccggcaacccg
ctggcactggagctgctggtggtggacgaagcctcgatggtcgacctggagatgatggcc
tcgctgcttgccgcactgccgccgcgtgcgcggctgatcctgctgggcgacaaggaccag
ctggcctcggtggaagccggcgcggtgctcggcgagttgtgcagccgcgcccgtgaaggc
cattaccgcccggccactcgcgactggctgcaagccgtggccggcgaagccatcgacgac
gtgctgatcgacagcgccggcagcgacctcgaccaggccgtggccatgctccgtcacagc
caccgcttcagcgccgacagtggcatcggtcaattggctgaagcggtcaacgccggtgat
atcccggccctgcgccaggtgtggaaggcgcagcacgaagacctcgcccgtatcgccgtg
gatgcccaggaaacccgcagcctgcgcgatctggtgatcgacggcgggcgcggcggcgac
ctcttcggcccggtcggctacgcccactacctgcgcgtggtcagcggctcgcgcccggcg
gacaacgccactcaggacgcactggatgcctgggcaaggaaggtgctggaagcccacggc
cagttccagctgctctgcgcattgcgtcgcgggccctggggcgtggaaggattgaacacg
ctgatcggcgagctgctgcaacgcgaagggctgattccttcggcgaacggctggttcgcc
ggtcggccggtgctggttactcgcaacgactacggcctgggcctgatgaacggcgatatc
ggcatcgccctggcgttgccgcagacggccgacgatggttcggtgcgctgggtggcgcgc
gtggccttcccggcgggcgacggcaccgacgccatccgctggatcctgcccagccgcctg
caggcggtggaaaccgtgttcgccatgaccgtgcacaagtcccagggctcggagttcacc
cacgccgcgctgctgctgcccgacagcctcaaccccatcctcacccgcgagctggtctac
accggcattacccgcgcacggaagtggttaaccctggccagtgccgggcgtggctggcag
gtgctggaggcggccacggagcggcgggtgcagcgggcgagtgggttgctgggcctctca
tga
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