Pseudomonas multiresinivorans: G4G71_29380
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Entry
G4G71_29380 CDS
T07281
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pmui
Pseudomonas multiresinivorans
Pathway
pmui03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmui00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G4G71_29380 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmui03021
]
G4G71_29380 (rpoB)
03400 DNA repair and recombination proteins [BR:
pmui03400
]
G4G71_29380 (rpoB)
Enzymes [BR:
pmui01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G4G71_29380 (rpoB)
Transcription machinery [BR:
pmui03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G4G71_29380 (rpoB)
DNA repair and recombination proteins [BR:
pmui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G4G71_29380 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
QJP11800
UniProt:
A0A7Z3BRP6
LinkDB
All DBs
Position
complement(6431243..6435316)
Genome browser
AA seq
1357 aa
AA seq
DB search
MAYSYTEKKRIRKDFSKLPDVMDVPYLLAIQLDSYREFLQAGASKDQVRDIGLHAAFKSV
FPIISYSGNAALEYVGYRLGEPAFDVKECVLRGVTFAVPLRVKVRLIIFDKESSNKAIKD
IKEQEVYMGEIPLMTENGTFIINGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLYSARI
IPYRGSWLDFEFDPKDCVFVRIDRRRKLPASVLLRALNYSTEEILNAFYDTNVYEIKGET
LNLELVPSRLRGEIASFDIKDAAGKVIVEAGRRITARHINQLEKAGISQLEVPFDYLIGR
TVAKAVVHPATGEIIAECNTELTVDALAKIAKAQVARLETLYTNDIDCGPFISDTLKIDS
TSNQLEALVEIYRMMRPGEPPTKEAAETLFGNLFFSAERYDLSAVGRMKFNRRIGRTEIE
GAGVLSKEDIVEVLKTLVAIRNGKGIVDDIDHLGNRRVRCVGEMAENQFRVGLVRVERAV
KERLSMAESEGLMPQDLINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVSALGP
GGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLATYARTNKYGFLESPYRVVK
EGLVSDDIVFLSAIEEADHVIAQASATLNEKGQLIDELVAVRHLNEFTVKAPEDVTLMDV
SPKQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGMERNVARDSGVC
VVARRGGVIDSVDASRIVVRVNDDEVETGEAGVDIYNLTKYTRSNQNTCINQRPLVQKGD
QVSRSDILADGPSTDMGELALGQNMRVAFMPWNGFNFEDSICLSERVVQEDRFTTIHIQE
LTCVARDTKLGPEEITADIPNVGEAALNKLDEAGIVYVGAEVQAGDILVGKVTPKGETQL
TPEEKLLRAIFGEKASDVKDTSLRVPTGTKGTVIDVQVFTRDGVERDSRALSIEKMQLDE
IRKDLNEEFRIVEGATFERLRSALVGSKADGGPALKKGAEITDEYLDGLERGQWFKLRMA
EDALNEQLEKAQAYISDRRQMLDDKFEDKKRKLQQGDDLAPGVLKIVKVYLAIKRRIQPG
DKMAGRHGNKGVVSVIMPVEDMPHDVHGTPVDIVLNPLGVPSRMNVGQILETHLGLAAKG
LGEKINRMLEEQRKIAELRVFLNEIYNEIGGRQESLDELNDNEILALANNLKGGVPMATP
VFDGAKEREIKAMLKLADLPESGQMRLYDGRTGNQFERTTTVGYMYMLKLNHLVDDKMHA
RSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMY
KNIVDGDHRMEAGMPESFNVLIKEIRSLGIDIELETE
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggcttactcatacactgagaaaaaacgtatccgcaaggactttagcaagttgccggac
gtcatggatgtgccgtatttgctggccatccagctggattcctatcgcgaattcctgcag
gcgggtgcaagcaaggaccaggtccgagacatcggcctgcatgcggccttcaagtccgtc
ttcccgattatcagctattccggcaatgctgccctggaatacgtcggctaccgtctgggt
gagccggccttcgatgtcaaggaatgcgtgctgcgcggtgtgacctttgcggtcccgctg
cgtgtgaaagtgcgcctgatcattttcgacaaggaatcgtcgaacaaagcgatcaaggac
atcaaggaacaggaagtctacatgggggaaatccccctgatgaccgagaacggtaccttc
atcatcaacggtaccgagcgcgtcatcgtttcccagttgcaccgctccccgggtgtgttc
ttcgaccacgaccgtggcaagacccacagctccggcaagctgctgtactccgctcggatc
attccttaccgcggttcctggctcgacttcgagttcgatccgaaggactgcgtgttcgtt
cgtatcgaccgtcgccgcaagctgccggcttcggtactgctgcgcgcgctgaactacagc
accgaggaaatcctcaacgcgttctatgacaccaacgtctacgagatcaagggtgagacc
ctgaatctggagctggtgccgtcgcgtctgcgtggcgagatcgccagcttcgatatcaag
gatgctgccggcaaggtcatcgttgaagcgggtcgccgtattaccgcacgacacatcaac
cagctcgagaaggccggcatcagccagctggaagtgccgttcgactacctgattggccgt
accgtggccaaggctgtcgtgcacccggctaccggtgagatcatcgccgagtgcaacacc
gagctgaccgtcgatgccctggccaagatcgccaaggcccaggttgcgcgtctcgaaacg
ctgtacaccaacgacatcgactgcggaccgttcatctccgacacgctgaagatcgactcc
accagcaaccaactggaagcgctggtcgagatctatcgcatgatgcgtcccggcgagccg
ccgaccaaggaagccgccgagaccctgttcggcaacctgttcttcagcgccgagcgttac
gacctgtctgccgttggccgcatgaagttcaaccgtcgtatcggtcgtaccgagatcgaa
ggcgccggcgtcctgagcaaggaagacatcgtcgaggtcctcaagactctggttgccatc
cgtaacggtaaaggcatcgtcgacgacatcgaccacctggggaaccgtcgcgttcgttgc
gtcggtgagatggccgagaaccagttccgcgttggcctggtgcgtgtagagcgcgcggtc
aaggaacgtctgtcgatggccgaaagcgaaggcctgatgccgcaggacctgatcaacgcc
aagccggtggctgctgcgatcaaggagttcttcggttccagccagctctcgcagttcatg
gaccagaacaacccgctctccgagatcacccacaagcgccgtgtctctgcactcggccca
ggtggtctgacccgtgagcgcgcgggcttcgaggttcgtgacgtacacccgacccactac
ggccgtgtgtgcccgatcgaaacccctgaaggtccgaacatcggtctgatcaactccctg
gccacctacgcccgcaccaacaagtacggcttcctggaaagcccgtaccgcgtggtgaag
gaaggtctggtcagcgacgacatcgtcttcctgtccgcgatcgaagaagctgaccacgtc
atcgctcaggcgtctgcgaccctgaacgaaaaaggccagctgatcgacgaactggtagcc
gtccgtcacctgaacgaattcaccgtgaaggcgccggaagacgtcaccctcatggacgta
tcgccgaagcaggtcgtttccgtcgctgcctcgctgattccgttcctcgagcacgacgac
gccaaccgtgcactcatgggttcgaacatgcagcgtcaggctgtaccgaccctgcgcgcc
gacaagccgctggtaggtaccggcatggagcgcaacgtcgcccgtgactccggcgtctgc
gtggttgcccgtcgtggcggcgtgatcgactcggtcgacgccagccgtatcgttgtgcgt
gtgaacgacgacgaagtcgagactggcgaagccggtgtcgacatctacaacctgaccaag
tacacccgttccaaccagaacacctgcatcaaccagcgtccgctggtgcagaagggtgac
caggtttcgcgcagcgacatcctggccgacggtccgtccaccgacatgggtgagctggct
ctgggtcagaacatgcgcgtcgcgttcatgccctggaacggcttcaacttcgaagactcc
atctgcctgtccgagcgcgtggtccaggaagatcgtttcaccacgatccacatccaggaa
ctgacctgcgttgcccgtgacaccaagctcggcccagaagaaatcaccgcggacatcccg
aacgtgggtgaagctgcgctgaacaagctggacgaagctggcatcgtctacgtcggcgcc
gaagtacaggccggcgacatcctggtcggcaaggtcaccccgaaaggcgagacccagctg
actccggaagagaagctgctgcgcgcgatcttcggtgagaaggcgtccgacgtgaaggac
acctccctgcgtgtgccgaccggcaccaagggcaccgtcatcgacgtacaggtcttcact
cgcgatggcgtggagcgcgatagccgtgccctgtccatcgagaagatgcagctggacgag
atccgcaaggacctgaacgaagagttccgcatcgtcgaaggcgcgaccttcgagcgtctg
cgttccgctctggtcggctccaaggccgacggcggtcctgccctgaagaaaggcgcagag
attaccgacgagtacctggacggtctcgagcgcggccagtggttcaagctgcgcatggcg
gaagatgctctgaacgagcagttggagaaggctcaggcctacatcagcgatcgccgccag
atgctggacgacaagttcgaagacaagaagcgcaagctgcagcagggcgacgacctggct
ccgggcgtactgaagatcgtcaaggtctacctcgctatcaagcgccgcatccagccgggc
gacaagatggcaggccgccacggtaacaagggtgtggtctcggtgatcatgccggtcgaa
gacatgccgcacgacgtgcatggcactccggtcgacatcgttctgaacccgctgggcgta
ccttcgcgcatgaacgtcggtcagatcctcgaaacccacctgggcctcgcggcaaagggt
ctgggcgagaagatcaaccgcatgctcgaagagcagcgcaagatcgctgagctgcgtgtg
ttcctgaacgagatctacaacgagatcggcggccgccaggagagcctggacgagctgaac
gataacgagatcctcgctctggccaacaacctcaagggcggcgtgcccatggctaccccg
gtgttcgacggtgccaaggaacgcgagatcaaggccatgctgaagctggccgatctgccg
gagagcggtcagatgcgtctgtacgacggccgcaccggcaaccagttcgagcgtacgacc
actgttggttacatgtacatgctcaagctgaaccacctggtcgatgacaagatgcacgca
cgttccaccggctcctatagcctggttacccagcagccgctgggtggtaaggcgcagttc
ggtggccagcgtttcggggagatggaggtctgggcgctggaagcctacggtgccgcctac
accctgcaggaaatgctgaccgtgaagtcggacgacgtgaacggccgtaccaagatgtac
aagaacatcgtggacggggatcaccgcatggaggccggcatgcccgagtccttcaacgtg
ttgatcaaagagatccgctcgctcggcatcgatatcgaactggaaaccgaataa
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integrated database retrieval system
