Pasteurella multocida ATCC 43137: DR93_13
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Entry
DR93_13 CDS
T03322
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pmul
Pasteurella multocida ATCC 43137
Pathway
pmul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DR93_13
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmul03019
]
DR93_13
Enzymes [BR:
pmul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DR93_13
Messenger RNA biogenesis [BR:
pmul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DR93_13
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AIN48821
UniProt:
A0A849CIY6
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All DBs
Position
complement(10735..12006)
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AA seq
423 aa
AA seq
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MQNNYLSQLRFSDLPLHHQVLAALQEKGFDYCTPIQALSLPMSLAGKDVAGQAQTGTGKT
MAFLTATFHHLLTQQGDKGGRQPRALILAPTRELAVQINNDAALLTKATGLKTGLAYGGD
GYEKQLKAIEQGVDILIGTTGRVIDYVKQGIVRLDKIQVVVLDEADRMFDLGFIKDIRYL
LRKCPAPQHRLTMLFSATLSYKVRELAFEDMNDPEYVEIEPLQKTGHRIKEELFYPSNQD
KMALLLTLLEEEWPERCIIFANTKHRCEDIWGYLAADGHRVGLLTGDVAQKKRLSLLKQF
TEGHLDILVATDVAARGLHISDVSHVFNYDLPDDREDYVHRIGRTGRAGESGVSISFACE
EYAMNLPAIEEYISHSIPVSQYDVAALLTLPKPYRIKRGNNNSKNSANSNRTFQKKRSLK
RNF
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataattatttatcgcaacttcgtttttctgatttacccttgcaccatcaggtg
cttgctgcgttacaagaaaaaggctttgattactgtaccccgattcaagcactttctttg
ccgatgagtttggcgggaaaagatgtggctggacaagcacaaaccggtacaggcaaaacg
atggcgtttttaacagcgacttttcatcatttattaactcaacaaggcgataaaggggga
cgtcagccgcgcgccttgattcttgcaccaacgcgtgagcttgctgttcaaatcaataat
gatgcagcgttacttacgaaagccacaggattaaaaacaggacttgcctatggcggtgat
ggctatgagaaacaactcaaagccattgagcaaggtgttgatattttaattggtaccact
ggacgtgtgattgactatgtgaaacaaggcattgtgcgtttagacaaaattcaagtggtc
gtgttagatgaagcggatcggatgtttgatcttggctttattaaagatattcgttattta
ttgcgtaaatgcccagcgccacaacaccgtttgaccatgctattttctgcgaccttatcc
tataaagtgcgcgaattggcgtttgaggatatgaatgatccggaatatgtagaaattgaa
cccttacaaaaaacgggacatcgtattaaagaagaacttttttatccttcaaaccaagat
aagatggcgttgttgctcacgttgttagaagaagaatggccagaacgttgcattattttt
gctaacacgaaacatcgttgtgaagacatctggggctatctggcggcagatggtcaccgt
gtggggctactcactggtgatgtcgcacagaaaaaacgcctttcactgttgaagcaattt
accgaagggcatttggatattctcgtggcgaccgatgtggctgcacgtggtttacatatc
tctgatgtgtcgcatgtgtttaattatgacttgccagatgatcgcgaggactatgtacac
cgtatcggtcgtactgggcgggcgggggagagtggagtgtcgattagttttgcgtgtgaa
gaatatgcgatgaatttgcccgcaattgaagaatatatctcacatagtattcctgtcagt
caatatgatgtggcggcgttattgaccttgccaaaaccgtatcggatcaagcgtggcaat
aacaacagcaaaaatagtgcaaattcaaaccgcacttttcagaaaaagcgcagtctaaaa
cgaaacttttaa
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