Pasteurella multocida ATCC 43137: DR93_1874
Help
Entry
DR93_1874 CDS
T03322
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pmul
Pasteurella multocida ATCC 43137
Pathway
pmul03410
Base excision repair
pmul03430
Mismatch repair
pmul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DR93_1874 (recJ)
03430 Mismatch repair
DR93_1874 (recJ)
03440 Homologous recombination
DR93_1874 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmul03400
]
DR93_1874 (recJ)
DNA repair and recombination proteins [BR:
pmul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DR93_1874 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DR93_1874 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DR93_1874 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
TetR_C_43
Motif
Other DBs
NCBI-ProteinID:
AIN48005
LinkDB
All DBs
Position
complement(1968737..1970458)
Genome browser
AA seq
573 aa
AA seq
DB search
MNKLIQRRAVPLGEAVSSDPLLDRLYRARQIQHPQQLDRTLAALLHPQQLDGIEAAVTLF
VQAYKQQEKIVIVGDFDADGATSTALAVLALRQLGFTQVAFLIPNRFEQGYGLSIAVAEQ
ALEKDVQLLMTVDNGVSSVEGVGFLKAQGVKVLITDHHLPPTQLPDADAIVNPNLSSCAF
PSKALAGVGVTFYLMLALRAKFRELGIFNQQTQPNFTDLLDLVALGTIADVVPLDQNNRI
LAYQGLARIRAERCRCGIRALAEVANRDMRQLSTSDLGFSLAPRLNAAGRLDNMSVGVEL
LLAEDMASARALALELDGLNQTRKEIEQGMKLEALEICRQLTALQQTLPFGIALYQADWH
QGVLGIVASRIKDHFHRPVVAFAQEQAGILKGSARSVEGLHLRDALERIHCLYPDMILKF
GGHAMAAGLTIQESRFADFQQAFNQIVGDWLDEGQRQGIVWTDGELDSVQLSLTTAECLK
EAGPWGQAFPEPVFDGEFKILQQRLVGEKHLKMMVEPKQGGPLLDAIAFNVDTRYYPDLS
IKLAKLAYKLDINEFRGNRHLQLLVDYIVPIGT
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaattaatccaacgtcgtgctgttcctttaggtgaggcggtgtcttctgatccc
ttacttgatcgcctctatcgtgcacggcagattcaacatcctcaacaattagaccgcact
ttagctgcccttttacatccgcaacaactggatggaattgaagcggcggtcactctcttc
gtacaagcctataagcaacaagaaaagattgtaattgtgggcgattttgatgcagatggt
gccactagcaccgccttagctgtactcgcattacgtcaattaggctttacacaagtggcg
tttttaattcctaatcgttttgaacaaggttatggtttgagcatcgcggtagcagagcaa
gctttagaaaaagatgtacagctattaatgaccgtcgataacggggtatcctcagtcgag
ggggtgggttttttaaaagcgcaaggggtcaaggtcttaattactgatcatcatttgcca
cctacacaattgcccgacgcggatgccattgtcaatcctaatttatcaagctgtgctttt
ccgtcaaaagccttagccggtgtcggagttactttctatttaatgttagcattgcgcgcg
aaatttcgtgagttggggatatttaatcagcaaacgcaaccgaatttcaccgacttattg
gatctcgtcgccttaggtactattgccgatgtggtgcccttagatcaaaataatcgtatt
ttagcctatcaaggtttagcacgtattcgcgcagaacgttgtcgttgcggtattcgtgcg
ttagcagaagtggctaatcgagatatgcgtcagttatctacttcggatttaggtttttct
cttgcaccacgtttaaatgcggcagggcgtttagataatatgtcagtcggtgttgagctt
ttattggctgaagatatggcaagcgcgcgagcattggcacttgaattagatggtttgaat
caaacgcgtaaagaaattgagcaaggcatgaaacttgaggcattagaaatttgccgtcaa
ttgaccgcacttcaacaaacccttccgttcggcattgcgctgtatcaagcggactggcac
caaggggtgttagggattgtggcttcacgtattaaagatcattttcatcgtcctgtggtt
gcatttgcgcaagagcaagccggtattctaaaaggctcagcccgttccgttgagggatta
catttacgtgatgcgttagagcgcattcattgtttgtatcctgacatgattttaaagttt
ggtgggcatgcgatggcggcaggcttaaccattcaagaaagccgttttgctgattttcag
caggcatttaatcaaattgttggtgattggcttgatgaaggtcagcgacaaggtattgtg
tggacggatggtgagcttgatagtgttcaattaagtttaacaaccgcggaatgcttgaaa
gaggcgggaccttgggggcaagcgtttccagaacccgtatttgacggcgagtttaaaatt
ttacagcaacgtttagttggcgaaaaacatcttaaaatgatggtcgaaccaaaacagggt
ggaccattgctcgacgccattgcctttaacgtcgatactcgttattatcctgacttgtcg
ataaaattagcaaaattggcatataaattagacattaatgagtttcggggcaatcgtcat
cttcagttattagtggattatattgtaccgatagggacttaa
DBGET
integrated database retrieval system
