Pasteurella multocida ATCC 43137: DR93_1885
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Entry
DR93_1885 CDS
T03322
Symbol
rnb
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pmul
Pasteurella multocida ATCC 43137
Brite
KEGG Orthology (KO) [BR:
pmul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmul03016
]
DR93_1885 (rnb)
Enzymes [BR:
pmul01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
DR93_1885 (rnb)
Transfer RNA biogenesis [BR:
pmul03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DR93_1885 (rnb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
DUF2274
Motif
Other DBs
NCBI-ProteinID:
AIN49755
LinkDB
All DBs
Position
1979819..1981795
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AA seq
658 aa
AA seq
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MFQNNPLLSQLKQQIRDSKQQVEGIVKGSDKAFGFLECDKKSYFIPPAAMKKVMHGDKIK
ALIEVVGEKEQAEPDALIEPMLTRFIARVRFNKDKKLQVLVDHPQINQAIGAAQDKSITE
TLQEGDWVVATLKTHPLRDDRFFFAQIQQFICRAEDELAPWWVTLARHGQSRYPVQGCAD
YPMIDQHTREDLTALHFITIDAETTLDMDDALYLEPIHQAEEQIGWRLVVAVADPTAYIP
LDSQIEQEARQRCFTNYLPGFNIPMLPPELSDERCSLMQDEIRPALVCYIETDLTGNITE
KPRFVSAYVQSKAKLAYDHVSDYLENCLDAWQPENPQIAQQIQWLHQFSQARIEWRKQHA
LLFKEKPDYSFILAENGSVQAIQAQYRRIANQMVEECMILANICAAHYLDEHAKCGIFNT
HSGFDKKYLESAHQFLLNQLSDETNQAVLATRYSVANLTTLAGYCQMRHDIELLNSDYLE
LRLRRFLTFAEFKSEIAPHFGLGLSGYATWTSPIRKYSDIVNHRLIKAVLTQQTCEKPQD
DLFVRLQEARRQNRLVERDIADWLYCRYLATQVEQKPTFQAEIQDVMRGGLRVQLLANGA
PMFIPASLIHDNKEAIQVNTDTLTLSIQGEVKYKLGDIIQVQLLDVKEETRSIVGTLC
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgttccaaaataatcccctcctttcacaattaaaacaacaaatccgagacagcaaacaa
caggtcgaaggtatcgtaaaaggttcagataaagcctttggttttcttgagtgtgataaa
aaaagttactttattccccctgctgcaatgaagaaagtcatgcatggtgacaaaatcaaa
gccctaattgaagtcgttggtgaaaaagaacaagccgaacccgatgccttaattgagcca
atgctcacacgctttatcgcgcgtgtgcgtttcaataaagataaaaaattacaagtgctc
gtcgatcatccacaaatcaatcaagccattggtgccgcccaagataaatcaataacagaa
acgttacaagaaggggattgggtcgttgctactttaaaaacacacccattacgtgatgac
agattctttttcgctcaaattcagcaatttatttgccgtgcagaagatgaactcgcgcct
tggtgggtcacgctagcacgtcatggacaatcgcgttatcctgtgcaaggttgtgcagat
tatccaatgatagatcaacatacacgtgaagatttgaccgcattgcattttatcaccatt
gatgcggaaacgacgttggacatggatgatgcgctttaccttgagcctattcatcaagcg
gaggaacagattggttggcgtttagtggtcgccgttgccgatccaactgcttatatcccg
cttgattcacaaattgaacaagaagccagacaacggtgttttaccaattatctaccgggc
ttcaacattccaatgttaccaccggaattgtctgatgaacgttgttctttaatgcaagac
gaaattcgtccggcgttggtctgctatatcgaaaccgatttaaccggtaatatcactgaa
aaaccgcgctttgtttccgcttatgtacaatccaaagcgaaattagcctatgatcacgtc
tctgattatttagaaaattgtcttgatgcatggcagcctgaaaatccacaaatcgcacaa
caaatccaatggcttcatcaatttagtcaagcacgcatcgagtggcgtaaacaacatgct
ttgttatttaaagaaaagccagactattcgtttatcttagcggagaatggcagcgtacaa
gccattcaagcacaatatcgtcgcattgcgaatcaaatggtagaggaatgtatgatcctc
gccaacatttgtgctgcacactatctcgatgaacatgctaagtgtggtatttttaatacg
cattctggttttgataaaaaatacctagagagtgcacatcaatttttattaaatcagtta
agtgatgaaacaaaccaagccgtcttagcaacacgttattctgtagcgaatttaacaaca
ttagcgggctattgccaaatgcgccatgatattgagttattaaatagtgactatctcgaa
ttgcgtttacgtcgtttcttaacatttgctgaatttaaatctgaaatcgcaccgcacttt
ggtttaggcttatcgggttatgcgacctggacatccccgattcgtaaatattccgatata
gtcaatcatcgcttaattaaagctgtgttaacccaacaaacttgtgagaaaccgcaagat
gacctgttcgtacgtttgcaagaagcgcgtcgtcaaaaccgtttagtagagcgtgatatt
gcagattggctttattgtcgttatctggcaacacaagtggaacaaaaaccaacattccaa
gcggaaattcaagatgtgatgcgagggggattacgtgtgcaactgcttgctaatggtgca
ccgatgtttatccctgcctccttaattcacgacaataaggaagcgattcaagtcaatacg
gatacgcttactctgtctattcaaggtgaagtgaaatataaattaggagatatcattcag
gtgcaactcttggacgtgaaagaagaaacgcgtagtattgtcggcactctttgttaa
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