Prunus mume (Japanese apricot): 103318618
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Entry
103318618 CDS
T03196
Name
(RefSeq) multisubstrate pseudouridine synthase 7
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmum03016
]
103318618
Enzymes [BR:
pmum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
103318618
Transfer RNA biogenesis [BR:
pmum03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
103318618
Prokaryotic type
103318618
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
103318618
NCBI-ProteinID:
XP_008218239
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All DBs
Position
LG1:25353502..25359811
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AA seq
713 aa
AA seq
DB search
MWLKPVPSCFSMLKPYCSATPPPPTTLKFITAMKTTEEPDVGIFCYISQLPGFRGILKQR
YSDFMVNEVDTEGNVVHLTNLDAPAETVKEIETKTHDATSKDYTTEIESFRSLVDPDDAE
RLEAIINQINSGSEDSILPIVLSPDYDKSHRRAVHNFFKENFKFLVTDTVDGPDASSKCI
RVRINSGGQNSRGRNSRKRKERGDKPFDSRGSDDWSENVGKFLRFHLYKENKDTQEALGI
IAKMLGIQPRSFGFAGTKDKRAVTTQRVTVFKQLATRLAALNDRLIGIKVGDFCYVKEGL
VLGQLLGNRFTITLRGVVADSEDTIKASAIALGKQGFINYFGLQRFGSGSVPTHLIGATL
LRGEWKSTVSLFLDPREGEKNAITEAREYYKETNDIEGTLRRLPRHLVSEKAILQCLKKC
PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGTDRVVLGDLVYCKGNETEKV
SEVVSSECVDENGNDTLDPIDLDDISGTNLPEERLNLVKAVTAEDILSGNYTIDDVVLPM
PGSRVIFPENDIAHVFHDLAKKDAISLTESVHNVKEFSITSMTGSYRRVFQKPMDFEWEI
LKYIDGNKPLVDTDFDKIAKTKPSSLNEDGRLHDKTKQSECLDNDIGLQTDDNGAKAKGE
ELPQAESLCDTNPQETQTAFKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttaagcctgtaccatcgtgcttctctatgctaaaaccctactgctctgcaact
ccaccaccaccaaccaccttgaaattcataacggccatgaaaactacagaggaaccagac
gtcgggatcttctgctacatctctcaactccctggatttcgcggcattttaaagcaaagg
tattctgattttatggtaaacgaagtagatacggagggaaatgttgtacatttgaccaac
ttggatgccccagcagagacagttaaggaaattgaaacaaagacgcatgatgctacaagt
aaagattataccaccgaaattgagtcgtttagatctcttgttgaccctgatgatgctgag
cgattggaagctataatcaatcaaattaattccggcagtgaagatagtattttgcctatt
gttctttccccagattatgataaatctcatcgaagggcagtgcataatttttttaaggaa
aacttcaagttccttgtcaccgacacagttgatggaccagatgcttcatcaaaatgcatc
cgggtgagaataaattcaggaggacagaacagcagaggcagaaattcaagaaaacgaaaa
gaaagaggtgataaaccatttgatagcagaggttcagatgattggtcagagaatgttggc
aagttccttaggtttcatctttacaaggagaacaaggatacacaggaagccttaggaatt
atagcaaagatgcttggtatccagccaaggtcctttgggtttgctggtacaaaggataag
cgtgctgtcacaactcaaagggttacagtttttaagcagcttgcaactagattagccgct
cttaatgataggttgattggtatcaaagtaggtgacttctgctacgtgaaggaaggactt
gtcctaggccaactcttgggaaaccgatttacaattacattgagaggagttgttgcagat
tctgaagataccatcaaagcatctgcaattgccttgggaaagcagggatttattaactac
tttggtttacaacgatttggaagtggttctgtgccaactcaccttattggagctacacta
ctccgaggagagtggaaatctactgtgagcttgttccttgatccaagagaaggggaaaaa
aatgcaattacggaggcacgagaatattataaggaaactaatgatattgaagggaccctg
aggcgattacctcgacatctggtttctgaaaaagctatattgcaatgtctgaagaaatgt
cctgggaactacttgcaagctttgaaagctattcctagaactttgaggatgatgtatgta
catagttaccaaagctatttgtggaaccatgcagcgagtatgagagtgcagaaatatgga
actgaccgagttgtgttgggagacttggtatattgtaaaggaaatgaaactgaaaaggtg
tcagaagttgttagttctgaatgtgtagatgaaaatggtaatgatacgcttgatcctatt
gatttagatgatatatctggaacaaatcttcctgaggaaaggcttaatcttgtgaaggct
gtaactgcggaagatatccttagtggaaattacaccattgatgatgttgtccttccaatg
cccggttccagagtcatttttccagaaaacgacattgctcatgtttttcatgatttggca
aagaaggatgcaatcagcttgacagagagcgtgcataatgtcaaggaattctcaataacc
agtatgactggaagctataggcgggtcttccaaaaaccaatggactttgaatgggaaata
ctaaaatatattgatggaaataaacctttggtggacacagacttcgacaaaattgccaaa
accaaaccatccagtctaaatgaagatggaagattgcatgataaaacaaaacaatcagag
tgcttagacaacgatatagggcttcagacagatgataatggggcaaaggcgaagggagaa
gaattgccacaagctgaatccctctgtgatactaatcctcaggaaactcagacggctttc
aagttgagctttactctcccagcttcttgttatgcaacaatggccatcagagagctactg
aagacatcgacatctgttgcgtttcacaaaacgttaaactag
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