KEGG   Prunus mume (Japanese apricot): 103318836
Entry
103318836         CDS       T03196                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103318836
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmum03019]
    103318836
   03041 Spliceosome [BR:pmum03041]
    103318836
Messenger RNA biogenesis [BR:pmum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     103318836
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     103318836
Spliceosome [BR:pmum03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    103318836
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 OB_RNB Ntox35 Spo7_2_N
Other DBs
NCBI-GeneID: 103318836
NCBI-ProteinID: XP_008218498
UniProt: A0ABM0N2F0
LinkDB
Position
LG1:complement(2142903..2145768)
AA seq 350 aa
MGSKSNAGHPHTGDGASPGKIFIGGLAKDTTYATFTKHFGKYGEIVDSVIMKDRFTGTPR
GFGFITYADPSVVDTVIEETHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSSVIE
EEMKSFFSKYGKVVEHQIIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMAGTQVEI
KKAEPKKASNPSPAPAYGSNSRARSFNDGFGAYGSSYGGFDGGFAPGPYRTPGGLGGRYG
GGYGYGYGSDSGEFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYGGGFGGGYGASGLGGY
GRGGEGYGSYGSSNYGGGYDSGPGATYGGAGGPYGRGGYSSSSRYHPYAR
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgggttcgaagtcgaatgccggtcatcctcacacaggcgatggcgccagccctggaaag
atcttcattggtggattggcaaaagacactacatatgctacatttactaagcacttcggg
aaatatggagagatagtggactcagtgataatgaaagatcgcttcacgggtacgccaagg
ggtttcggttttattacctatgccgatccatcagttgttgacacagttattgaggaaact
catgttatcaatggcaagcaggttgagatcaagagaacaattccaaaaggacaagggcaa
tcaaaggattttaagacaaagaagatatttgttggtggaatcccatcatcagtcattgag
gaggagatgaaaagcttcttctcaaagtatgggaaagtggtagaacaccagatcatacga
gaccatgagaccaatcgttctcgaggctttggatttgtaatttttgacagtgaggaagtt
gtagatgagttattatctaaaggaaacatgattgatatggcgggtacccaggtggagatc
aagaaagctgaaccaaagaaagcctcaaatccatcacctgctcctgcatatggtagcaat
tctagggctcgttctttcaatgatggctttggtgcatatggcagttcttatggtggtttt
gatggagggtttgcccctggcccttataggacaccaggtggtcttggtggtagatatggt
ggtggttatggttatggttatggtagcgatagtggagaatttggcggtggttatgggggt
tttggcagcagtagcttaggtggctatcgaggtgaatcttcccttggttatagtagtcgc
tttggaccctatggtggtggctttggtgggggttatggtgcaagtggtttaggtggttat
ggccgaggtggtgaaggctatggaagttacgggagttcaaactatggtggtggatatgac
tctggtcctggtgctacttatggcggagcaggtggaccgtatggaagggggggctatagt
agcagtagtcggtaccatccctatgcaagatag

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