Prunus mume (Japanese apricot): 103318873
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Entry
103318873 CDS
T03196
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmum01009
]
103318873
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103318873
Protein phosphatases and associated proteins [BR:
pmum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103318873
Membrane trafficking [BR:
pmum04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
103318873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
Motif
Other DBs
NCBI-GeneID:
103318873
NCBI-ProteinID:
XP_008218529
LinkDB
All DBs
Position
LG1:complement(26172530..26182201)
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AA seq
1010 aa
AA seq
DB search
MNQSHSSNNSSNSNSHGSNKKMVVMDAQPSRPGRSHSRSNSWVGWWSSSASVAPPEFAPL
IPKSASDSVTRSDFQPYLASISDHYNRFEDIINHVKKENSDIDSIGGQGEALVACLREVP
ALYFKEDFALEDGATFRSACPFTNVSENLVLQEKLSHYLDVVELHLVKEISLRSNSFFEA
QGQLQDLNVKIIEGCSRIRELKETILLLDVDLVECARQIHDLNETRSNLLALQQKLRLIL
YVNQALSALKLLVASADCAGALDVTDDLQHLLDGDELTGLHCFHHLRDRVAASIESINSI
LSAEFMRASIHDAGDTDVIIISRAQARASILLNGEDGEIKLDDEETSNYQDRLLPVIIGL
LRTAKLPSVLRLYRDQLTADMKAAIKNAVAELLPVLVSRPMESDFTPGERIVDADGIGAS
LASKLRSLSSESFVQLLSAIFLIVRAHLVRAAEVKKAIEWIMCNLDGHYAADSVAAAIAV
GAAAAETAQESDGQGGLLPSLSPQRVAAKALPFQGKANDAASPSNMSKNFRADVLRENTE
AVVAACDAAHGRWAKLLGVRALLHPKLRLQEFLSIFNITQEFITATEKIGGRPGFSIRGT
LQSQAKAFIEFQHESRMAKIKAVLDQETWVEVDVPDEFQVIVTSLFCSELVSENLDAIEG
NMETSYREMATSSNNSHTDNTASSIAEQQIKRADSSDLSADETAKEKCTQNADGVEKNKP
DVANSVAQNNHSNMKERGKSTSQTLFFKGVGFHMVNCGLILVKMLSEYIDMNNFFPALSS
EIVHRIVEILKFFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQVISFTYAIIPEIRQI
LFLKVPETRKALLLSEIDRVAQDYKVHRDEIHTKLVQIMRERLLVHLRGLPQIVESWNRP
EEADPQPSQFARSLTKEVGYLQRVLTRTLHEVDVQAIFRQVVIVFHSQISEAFSRLEIST
PQAKDRLYRDVKHILGCIRSLPSDKMSESSIPNWGQLDEFVVQRFGAEAG
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagagccactcaagcaacaacagcagcaacagcaacagccatggttctaataag
aaaatggtagtcatggacgcccagccttcccgacccggaaggtcccacagccgatccaat
tcctgggtcggctggtggtcctcctccgcctccgtcgccccgcccgaattcgcgcccctc
atacccaaatccgcatccgactccgtgacccgatccgacttccagccttacctcgcctcc
atttccgatcactacaaccgcttcgaggacatcatcaaccacgtcaagaaggagaactcg
gacatcgactccatcggcggccaaggcgaagccctcgtcgcctgcctccgagaagtcccc
gctctctatttcaaagaagactttgccctagaagacggtgccacatttcgatcggcctgc
ccgttcacgaacgtctccgagaatctggtgctccaggagaagctctcgcattacttggac
gtcgtggagcttcacttggtgaaagagatctcgctgcgttccaactccttcttcgaggct
caggggcagttgcaggacttgaatgtgaagatcatcgaaggatgtagtcggattcgcgag
ctcaaggagaccattctgctcttggatgtcgatttggttgagtgcgccaggcagattcat
gatttgaatgaaaccaggagtaatttgttggctcttcaacagaaattgaggctcattctt
tatgtcaaccaagctctttccgcgcttaaactgcttgttgcctctgcagattgtgctgga
gctttggatgtcacagatgatttgcagcatttgctggatggggatgagcttactggtcta
cattgctttcatcacctcagggatcgcgtagcagcttcaattgaatccataaacagcatt
ctttctgcagagtttatgcgtgcttcaatacacgatgctggagatacagatgttataatt
atatccagagcgcaggcaagggcgtcaattctcttgaatggagaagatggtgaaattaag
ttggacgatgaagaaacctccaattatcaagatcgtcttcttcctgtcatcattggattg
cttagaacagccaagctcccttctgtgttgaggttatatcgtgaccagcttacagctgac
atgaaggcagctattaaaaatgcggttgcagagctgcttcctgttcttgtttcccgaccc
atggagtcagactttacacctggagagcgaatagtagatgcagatggtattggtgcatca
cttgcaagcaagttgaggagcctgtcatctgaaagctttgttcaacttttaagtgctatt
ttcctgattgtaagggcacatctagtgcgggctgctgaagtaaagaaggccatcgagtgg
attatgtgcaaccttgatggtcattatgcagcagattcagttgctgctgcaatcgctgtt
ggtgccgcagctgcagaaacagctcaagaaagtgatggtcaaggtggtttgcttccctcg
ctttcacctcagagagttgctgcgaaggcccttccatttcaagggaaagcaaatgatgca
gcaagtccttcaaacatgtctaagaattttagagctgatgtgttacgggaaaacacagaa
gctgttgttgcagcatgtgatgctgcccatggaagatgggcaaagctacttggggttcgt
gctctacttcatcctaagttgagattgcaggagtttttgagcatctttaacatcacccaa
gagtttataactgctacagagaagatagggggaaggccaggatttagcatcaggggaacc
ctacagtcacaagccaaagccttcatcgaatttcagcatgaatctcgaatggcaaaaatt
aaggccgttcttgaccaagaaacatgggttgaagtagatgttcctgatgaatttcaagtc
attgtcacttcactattttgttctgaattggtatctgagaacctggatgctatcgaaggt
aatatggaaacaagctatagggagatggccacaagcagtaataattcacatacagacaat
acagcatcatcaattgccgaacagcaaattaaacgggctgattcgagtgacttatccgcg
gatgagactgcgaaagagaagtgtacacaaaatgctgatggagtggaaaaaaataagcct
gatgtcgcaaattctgtggctcaaaataaccacagcaacatgaaggagcggggaaaatca
acctctcaaacccttttcttcaaaggtgttggttttcacatggtaaactgtggcttgata
ttggtgaagatgttgtcagagtacattgatatgaacaatttttttccagcactgtcctca
gaaattgttcatcgtattgtagaaattttaaagtttttcaatacaagaacgtgccagctt
gttcttggtgctggtgccatgcaggtatctggtttaaagtccatcacttctaaacacctg
gccttggcaagtcaagtcatcagttttacgtatgctattattcctgaaatcaggcaaatt
ctttttctaaaagtacctgagacaagaaaggcactgttgctatctgaaattgatcgagta
gctcaggattacaaggttcacagagatgaaatacatacgaagctggttcagatcatgaga
gaaaggttattagttcatctacgtgggttacctcaaattgtagagagctggaatagacct
gaagaagctgacccacagcccagccagtttgctcgatcccttactaaggaagttggatac
ttgcaacgtgtcctaactcgaactttacatgaggtcgatgttcaagcaattttcaggcaa
gtggttatagtcttccattcacaaatttcagaagcattttcacgcttagagatcagcaca
ccacaggccaaggacaggctgtatcgggatgtcaaacacattcttggatgtattcgctcc
ttgccttctgataaaatgagtgaatctagtattccaaactggggtcaactagatgaattc
gtggttcagagatttggggcagaagctggttaa
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