Prunus mume (Japanese apricot): 103318904
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Entry
103318904 CDS
T03196
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103318904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmum03021
]
103318904
Enzymes [BR:
pmum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103318904
Transcription machinery [BR:
pmum03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
103318904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
CSPP1_C
Motif
Other DBs
NCBI-GeneID:
103318904
NCBI-ProteinID:
XP_008218570
LinkDB
All DBs
Position
LG2:complement(188902..206109)
Genome browser
AA seq
1184 aa
AA seq
DB search
MTSKREEKMKKMFGKPSAESEDYAAVRELFRHHIESFDHFVTAGLETMLNKIKPIEVVDS
STGTSLAIWFGKPFLFPPQKEESKTARGKLLPFECRQAKLSYTGKFMADVYFKYNDGPAI
RENFNFGQLPIMLMSKLCHLRGANPEKLVSCKEESSEMGGYFVLNGLERVVRLVILPKRN
YPTSMVRNSFRDRKEGYTDKAVVIRCAREDQSSVTVKLYYLRNDSARLGFWIQGREYLLP
VGLVLKALIDTTDHEIYKNLTCCYVEKDESCDVKKYEKGKGNVGTQLVGERAHIILDEVR
DFITRRQCLEHIGGHFRPLMRGLEDESDLSVVGEAVLEDYIFVHLDKGFDKFNLLIFMVQ
KLFSLMDQTSLPDNPDALQNHEVLLPGHLITIYLKEKLEDWLQRAKKLLQDQINNKSKTF
DFCSLVNVKKVLDKNPSKHISLAVENMLKTGRLVTQSGLDLQQRAGLTVQAERLNYLRYL
SHFRAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRITSYFDA
QGNIRNFLHIRESILTVLSELQMISSVPKLVQAGPPANLSVLLDGCVVGSISSKVVEKVV
AQLRRLKVSASSVIPDDLEVGYVPLSSRGAYPGLYLFTSPSRFVRPVKNISIPSDEGQNI
ELIGPFEQVFMEIRCPDGRDGGRKDAFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMY
QCQMAKQTMAFSLQALCNRADQKLYHLKTPQSPIVRTSAYKKYCIDEYPTGTNAIVAVLS
YTGYDMEDAMILNKSSVDRGMFHGLIYQTETIDLSDQKSRSDRSRKFFRRSNINKNSSID
SDGLPYVGQTIKSNEELYSIHNEVTNESRSIKHKGSEPVIVDYVAIDGKKLLQKASIRFR
HPRNPIIGDKFSSRHGQKGVCSQLWPDVDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLE
SVAAKGGSLHGKYVDATPFANSKNVNEETPPQSKTLVDELGEMLKVKGFNYHGTEVMYSG
VYGTELTCEIFMGPVYYQRLRHMVSDKYQVRSTGTIDQITHQPIKGRKRGGGIRFGEMER
DSMLAHGAAYLLHDRLHTCSDYHIADVCSICGSILTTSFVKPERRVGRAVKGLPPIRASK
KVICHACQTSRGMETVAMPYVFKYLAAELAAMNIKLTLQLNNAA
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgaagagagaagagaagatgaagaagatgtttgggaagccatcggctgagtcg
gaggactacgcggcggtgcgtgagctcttcaggcaccacatagagtcattcgatcacttt
gtcactgctggtcttgagactatgctcaataaaatcaagcccatcgaagtcgtcgactct
tccaccggaacaagcctagcaatttggtttggcaaaccttttttattcccacctcaaaag
gaagaatcaaaaactgcccgtggaaagctgcttcctttcgaatgtagacaggctaaactt
tcctacacagggaaattcatggcagatgtttactttaagtataatgatggacccgcaata
agagagaatttcaattttgggcagcttcccatcatgctaatgtcaaagctttgccactta
agaggtgctaatcctgaaaagctagtttcttgcaaagaagagtcatcagaaatgggtggt
tacttcgtgttaaatgggctcgagagagttgttcggcttgtcatattgccaaagcggaat
tatccaacgagtatggtgcgaaattcatttcgtgatcgaaaggaaggatatactgataag
gcagttgtaataaggtgtgcaagagaagatcaatcttcagtaacagtcaaattgtactac
cttcgtaatgatagcgcaagacttggattttggatacaagggagggaatacttgcttcct
gtgggtcttgtcttaaaggctcttattgacactactgatcacgaaatttataaaaatttg
acatgttgctatgttgagaaagatgagagttgcgatgtcaagaaatatgagaaaggaaag
ggtaatgttggcactcagcttgtgggtgagcgggcacacattattctagatgaagtgaga
gactttatcactcgccgtcaatgtctagagcacattggagggcacttccgacctcttatg
cgtggactggaggatgaaagtgatctttctgtggttggagaagctgttctagaggactac
atatttgttcaccttgataaagggtttgacaaattcaatctgctcatatttatggtgcag
aagcttttttctcttatggatcagacatccttgccagacaatccagatgccttgcaaaat
catgaagtcttactccctggtcacttgattaccatatatctcaaggaaaaactagaagat
tggttgcaaagggccaaaaaacttcttcaagatcagatcaacaacaaaagcaagactttt
gatttttgcagcttagtaaatgtaaagaaggttttggataaaaatccttcaaagcacatt
agtttagctgttgaaaatatgttgaaaaccggaaggcttgttacacaatcaggtctagat
ttgcagcagagggcaggcttaacggttcaggcagagaggcttaattatttgcgttactta
tctcattttcgtgccgtccatcgaggagcttcatttgctggacttcgcaccacaagcgtc
cggaaattgctacctgaatcttggggttttctttgcccggtgcatacacctgatggagag
ccgtgtggcttgttgaaccatatgacttccacttgtagaattacatcctactttgatgca
caaggaaatattagaaacttcttgcatatccgagagtctattctcactgttctgagtgag
cttcaaatgatatcttcagtgccaaagctggttcaagctggtcctcctgcaaatctttct
gttcttttagatggctgtgttgttggttctatatcttccaaagtagttgagaaagttgtg
gctcagttaaggaggctgaaagtgtcagcttcttcagtgattcctgatgatctggaagtg
ggatatgtacctttaagctcgcgtggggcatatcctggtctgtaccttttcacttctcct
tctagatttgttcggccagttaagaatatttcaattccttctgatgaaggtcaaaatatt
gaacttattgggccctttgaacaggttttcatggaaataagatgtcctgacggtcgagat
ggtggaaggaaagatgctttccctgcaactcatgaagaaattcatccaacaggaatgctc
agtgtcgtcgctagtcttacaccttggtcagatcataatcagagcccacgaaatatgtac
cagtgtcagatggcaaaacaaacaatggccttctctttacaagcactttgcaatcgtgca
gatcaaaagctgtatcatcttaagactcctcagtctcccattgttcgtacaagtgcatat
aagaagtactgcattgatgaatatccaacaggcacaaatgcaatcgttgctgtactgtca
tatactgggtatgatatggaggatgccatgattttaaacaagtcatctgtggatcgtgga
atgtttcatggactaatttatcagacagaaacaattgacttgtctgatcaaaagagcagg
tcagatagatcacggaaattttttaggagaagtaacatcaataagaattcctcgatcgat
tcagatggtcttccttatgttggtcagacaataaaatccaatgaagaattgtatagcatt
cataatgaggtgacaaatgagtcaagatccatcaaacacaaaggttcagagcctgttatc
gttgactatgttgctattgatgggaagaagcttcttcagaaggcgagcatacgctttcga
caccctagaaaccctatcattggtgataaatttagcagccgacatggacaaaagggtgtt
tgctcccagttgtggcctgatgttgatatgccattttctggggttacaggaatgcgtcca
gatcttatcatcaatccacatgcattcccctcaaggatgacaatagcaatgctcttggaa
tcagtcgctgcaaagggaggtagcttacatggaaaatatgttgatgcaacaccatttgct
aattcaaagaatgttaatgaagagactccaccacaatcgaaaacacttgttgatgaactt
ggtgaaatgttaaaggttaaagggtttaactaccatggtacagaggtaatgtacagcggg
gtctatgggacagaactcacatgtgagatctttatgggtcctgtttattatcaacgccta
cgacatatggtttcagacaaatatcaggttcgttccactggaacgatagaccagatcacc
caccagcctatcaagggacgaaaaagaggtggtggtatacgttttggtgaaatggagcga
gactctatgcttgcccatggggcagcatatctgttgcacgacaggcttcatacgtgttcc
gattatcacattgctgatgtatgttctatttgtggaagcatcctaacgacctcattcgtc
aagccagaaagacgggttggacgtgcggttaagggactgccgcccataagagcctcaaag
aaggtcatttgccatgcttgtcagacgagtagagggatggagactgttgcaatgccttat
gtcttcaaatatttagcagctgagttagcagctatgaacataaaattgaccctccagcta
aataatgcagcgtga
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integrated database retrieval system
