Prunus mume (Japanese apricot): 103319012
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Entry
103319012 CDS
T03196
Name
(RefSeq) autophagy protein 5
KO
K08339
autophagy-related protein 5
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
103319012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103319012
03029 Mitochondrial biogenesis [BR:
pmum03029
]
103319012
Membrane trafficking [BR:
pmum04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
103319012
Mitochondrial biogenesis [BR:
pmum03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103319012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_HBR
ATG5_UblB
Motif
Other DBs
NCBI-GeneID:
103319012
NCBI-ProteinID:
XP_008218719
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Position
LG2:969901..977212
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AA seq
360 aa
AA seq
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MDMEAQRYVWDGAIPLQIHLHESDVATLPAPPPALILAPRIGYLPLLASHLKPHFSSALP
PRLDTIWFEYKGLPLKWYIPTGVLFDLLCAEPERPWNLTVHFTGYPGNILIPCEGEDSVK
WSFINSLKEAAYIINGNCKNVMNMSQPDQVELWRSVLNGNLEPYRRVSTKLKLGTVGDEY
GAKLNLSGDTDFSGQVKAGRVPVRLYVWSVSEDFEDLEDAPQIDSWDKVSYINRPVEIQG
GEGGRCFTLHDAVKSLLPEYFLDKSLTNEESLTVGDEHEQRVSSEDASSDRKAKEEVENS
SEHITSCYQHDDAEIKLVRIQGIHPKLEIPFSWVANNLMNPEHFLHICVYLKVPQANTMS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggatatggaagcacagaggtacgtatgggacggagcaattcctttgcagattcatctc
catgaatccgacgttgccactctccctgctcccccaccagccctgatcttagcacctcga
attgggtacctaccattgttggcatcgcatctaaaacctcacttcagtagtgcacttcct
cctcggctagatactatttggtttgagtacaaaggcttgcccttgaaatggtatatacca
acaggagttctatttgatcttctatgtgcagaaccagaaagaccttggaatctgacggtg
cattttacaggatatccggggaacatattgattccttgtgaaggtgaagatagcgtaaag
tggagctttattaattcattgaaagaggctgcatatataattaatgggaattgcaagaat
gtgatgaacatgtctcaacctgatcaggtggagctctggcgctctgtcttaaatggtaat
ttggaaccctaccgacgggtgtctactaaacttaagcttgggacagttggggatgaatat
ggagcaaagttgaatttaagtggtgacactgatttttctggacaagtgaaggcaggccga
gttccagttcgcttatacgtttggagtgtcagtgaggactttgaagatttagaagatgca
cctcagattgatagttgggataaagtctcttacataaaccggcctgttgagatacaagga
ggagaaggaggtagatgcttcactttacatgatgcagtgaagagccttctgccagagtat
tttcttgacaaatccttgaccaatgaagaatcattgactgtaggtgatgagcatgaacaa
agagtttcctctgaagatgcaagtagcgatagaaaggccaaagaggaagtagaaaactca
agcgaacatatcacgtcttgctatcaacatgatgatgctgaaatcaagctagttcgtatc
caaggtattcatccgaaattggagataccattttcttgggtggcaaacaacttaatgaac
cctgagcactttcttcatatctgtgtgtatttgaaagttccacaagccaataccatgtca
tag
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integrated database retrieval system