Prunus mume (Japanese apricot): 103319038
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Entry
103319038 CDS
T03196
Name
(RefSeq) ubiquitin-like domain-containing CTD phosphatase
KO
K17618
ubiquitin-like domain-containing CTD phosphatase 1 [EC:
3.1.3.16
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmum01009
]
103319038
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
103319038
Protein phosphatases and associated proteins [BR:
pmum01009
]
HAD phosphatases
Fcp/Scp phosphatases
103319038
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
ubiquitin
Motif
Other DBs
NCBI-GeneID:
103319038
NCBI-ProteinID:
XP_008218756
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All DBs
Position
LG2:1230184..1233763
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AA seq
338 aa
AA seq
DB search
MAMAGVGVGSTSTTSLPEEEITLTVKWSGKEYTVRVCGDDTVGELKRRICQATDVLPKRQ
KLLYPKILPSKLADDAVLLSSLPFKSSLKMTMIGTTEDDIIVDQVESPDIVDDFELPQDE
AVEIKDKHGNKQKLRRRISQYKIELRNPCREGKKLLVLDIDYTLFDHRSPAENPLQLMRP
FLHEFLAAAYAEYDIMIWSATSMKWVELKMAELGVLSNPNYKITALLDHLAMITVQSDSR
GIFDCKPLGLIWAQFPEFYSSKNTIMFDDLRRNFVMNPQNGLTIKPFKRAHSSRDSDQEL
RKLTTYLLAIAELDDLSNLDHNNWQSFSEDNVKRRRHQ
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggcaggagtaggtgtaggctcaacctcaacgacgtcgttgccggaggaggag
ataacactgacagtgaagtggagcgggaaggagtatacggttcgcgtatgcggggacgac
acggtgggcgagctcaagcgccgaatctgccaagccaccgacgtcttgcccaaacgtcaa
aagcttctctacccaaaaatcctcccttcaaagctcgccgacgacgccgttttgctctcc
tctctccccttcaagtcctccctcaaaatgaccatgattggtactacggaggatgacatt
atagtggatcaagtggagtctccagacattgttgatgattttgagcttccccaagatgag
gctgttgaaattaaagataaacatggcaataagcagaagttgaggaggcgtataagtcag
tacaagattgaacttcggaatccatgccgggaaggaaagaaactgcttgtgctggatatt
gattatactctatttgatcaccggtccccagcagagaacccacttcagcttatgcggcct
tttcttcatgagtttcttgcagctgcctatgctgaatacgacatcatgatatggtctgca
accagcatgaaatgggttgaattgaagatggctgagcttggtgtactcagcaatcccaac
tacaaaatcacagctcttctagaccatttagcaatgatcacagttcaatcagattcccgt
gggatctttgattgcaagccgttaggcttgatctgggctcaattccctgagttctacagt
tcaaaaaacactataatgtttgatgatctgcgaaggaattttgtgatgaatccacaaaat
ggtttaaccatcaagccattcaagagggctcattctagccgagacagtgatcaggagctt
aggaaacttacaacatacttgcttgccattgcggaacttgatgacttgagcaaccttgat
cataataactggcagtcatttagtgaggacaatgtcaaaagacgtcggcatcaatga
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