KEGG   Prunus mume (Japanese apricot): 103319104
Entry
103319104         CDS       T03196                                 
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03013  Nucleocytoplasmic transport
pmum03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103319104
   03015 mRNA surveillance pathway
    103319104
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmum03019]
    103319104
   03041 Spliceosome [BR:pmum03041]
    103319104
Messenger RNA biogenesis [BR:pmum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     103319104
Spliceosome [BR:pmum03041]
 Complex C
  Other components
   EJC/TREX
    103319104
SSDB
Motif
Pfam: Pinin_SDK_memA
Other DBs
NCBI-GeneID: 103319104
NCBI-ProteinID: XP_016647920
LinkDB
Position
LG2:complement(1789541..1795930)
AA seq 419 aa
MGSAAVEKTEEELRKEIDELQRQQREITERLRDPRGLRKGGLAAAGPRNFAANGARPRGF
TRPADRPDEDQPPAKRRLSSAVVKVEDGEITEIAEEAKDGKKNDTNEEAKADQSDRKLSN
SQQSGWSRRDGNHGAAKKDFEIPAPDHVPRVLPKEQDPSLVNRNKRMLGQLLGTLEKFRK
EDMQLSGTEAFMRRSNSLQRAEQRAREESERLRQQEREQIAEKRRRDLTLRARVNAKTEE
KRLELLFLQWSEHNKKLCNFIRTKAEPPIYYLPKKPLDEDPTLAEQRKEKEFLEWKAARR
EELTEYQKQIGEQCIANAEKELERWQNARKPRKANNDVMNLQETMDKELDTHRLEHGPKK
RKIPDGSNNDEDEDDVEDINVAEDYMIDDVLDVDDNSRRIDEIVKPEAGNTSPNADAVE
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgggaagcgccgcagttgagaaaacagaggaggagctccgtaaggagatcgatgaactc
caaaggcaacagcgcgagattacggaacggcttcgagaccctaggggacttcgcaaggga
ggcttggcggctgctggtcctcgcaattttgccgccaatggtgctcgtccgcgaggcttt
actcgacccgcagataggcctgatgaggatcaacctcctgcaaaacgccggctttcatca
gctgttgtcaaggtggaggatggagaaatcactgaaattgctgaagaggccaaggatggg
aagaagaatgatacaaatgaggaagctaaagctgatcagagtgataggaagttgtccaat
tcccaacaaagtggctggtcaaggagggatggaaatcacggagcagcaaagaaggatttt
gaaattccagcaccagatcatgttccaagagtattgccgaaagaacaggatcccagcttg
gttaacaggaacaaaagaatgctaggacaacttttggggactctagagaaattcaggaaa
gaggacatgcaactttcaggaacagaggcattcatgcggagatcaaattcattacaaaga
gctgagcaaagggctcgtgaagagagtgaaagacttaggcaacaggagcgtgaacaaatt
gcggaaaagcggaggagagatctgactctgcgggcacgtgttaatgccaagacggaagaa
aagagattggaactgctttttcttcagtggagtgagcataataaaaaactttgcaatttt
ataaggactaaggcagagcctccaatttattatctgcccaagaaaccattggatgaggat
cctacgttagctgagcagcgaaaagaaaaggagtttctggaatggaaagctgcacgaaga
gaggaactgactgagtaccagaagcagattggggagcagtgtattgccaatgctgaaaag
gagttggagaggtggcaaaatgcaaggaaaccaaggaaagcaaacaatgatgtgatgaac
ttacaggaaacaatggacaaagaattggacacacataggcttgagcatggccccaagaaa
agaaagatccctgacggaagcaacaacgatgaagatgaggatgatgtggaagatatcaat
gtagcagaggactacatgattgatgatgtgctagatgttgatgataacagccggaggatt
gatgaaatagttaaaccagaagcaggtaataccagtccaaatgcggatgctgttgagtag

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